RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZNF883P0CG24 379 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 CCR2P41597 374 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 AFMP43652 599 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 OR1G1P47890 313 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 NLRP11P59045 1033 aaKnown RBP12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 AACSQ86V21 672 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 SPACA7Q96KW9 195 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 SNTG2Q9NY99 539 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 NOP58Q9Y2X3 529 aaKnown RBP12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
HDGFL3-204ENST00000563790 ARID1BQ8NFD5 2236 aaPredicted RBP12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 K7ENP7 123 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 GNAI2P04899 355 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 JUPP14923 745 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 PCBP4P57723 403 aaKnown RBP12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 INO80CQ6PI98 192 aaPredicted RBP12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 ADGRF4Q8IZF3 695 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
HDGFL3-204ENST00000563790 ZBTB42B2RXF5 422 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 FLRT2O43155 660 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 TNFSF14O43557 240 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 HBP1O60381 514 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 POMCP01189 267 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 DARSP14868 501 aaKnown RBP12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 FGFR4P22455 802 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 DCTP40126 519 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 SLC26A2P50443 739 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 RAB27AP51159 221 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 STAT5BP51692 787 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 DSC1Q08554 894 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 PGBD4Q96DM1 585 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 ZFYVE19Q96K21 471 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 ZDHHC5Q9C0B5 715 aa12.1□□□□□ -0.47
HDGFL3-204ENST00000563790 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 ADAM12O43184 909 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 C22orf31O95567 290 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 DRD1P21728 446 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 PPARAQ07869 468 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 TNK2Q07912 1038 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 IGFBP7Q16270 282 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 FRMD1Q8N878 549 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 RHBDD1Q8TEB9 315 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 SEMA3CQ99985 751 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 CORO1BQ9BR76 489 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
HDGFL3-204ENST00000563790 ANO9A1A5B4 782 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 AP5Z1O43299 807 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 MOSPD3O75425 235 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 GRIK2Q13002 908 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 TARDBPQ13148 414 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 RAB33AQ14088 237 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 PTPAQ15257 358 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 PSMD5Q16401 504 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 PLEKHG6Q3KR16 790 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 IFNL3Q8IZI9 196 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
HDGFL3-204ENST00000563790 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 GCOM1H8Y6P7 765 aaPredicted RBP12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 RANBP6O60518 1105 aaKnown RBP12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 ITGB5P18084 799 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 GNAT2P19087 354 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 SPIRE1Q08AE8 756 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 LINC00303Q3SY05 128 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 CCDC157Q569K6 752 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 PCNX4Q63HM2 1172 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 MMP21Q8N119 569 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 METTL13Q8N6R0 699 aa12.07□□□□□ -0.48
HDGFL3-204ENST00000563790 GPRASP2Q96D09 838 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms