RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ETAA1Q9NY74 926 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SNX3O60493 162 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 UBOX5O94941 541 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 NCALDP61601 193 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 PRKCEQ02156 737 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SLC15A2Q16348 729 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 BBS9Q3SYG4 887 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TAS1R2Q8TE23 839 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 GANQ9H2C0 597 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 O00370 1275 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 P4HA1P13674 534 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 NPTX2P47972 431 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 DLG4P78352 724 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TAF11Q15544 211 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 MAPK6Q16659 721 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SMC6Q96SB8 1091 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ASTN1O14525 1302 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 AHCYL1O43865 530 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 PHF2O75151 1096 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 RARAP10276 462 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 CA4P22748 312 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 KCNJ2P63252 427 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 CXCL9Q07325 125 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 LONRF1Q17RB8 773 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 CDR2LQ86X02 465 aaPredicted RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ARHGEF26Q96DR7 871 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ADPGKQ9BRR6 497 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ABCF3Q9NUQ8 709 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 TAS2R14Q9NYV8 317 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.63
RNF40-204ENST00000563683 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 CYP3A7-CYP3A51PA0A087WV96 503 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 BRAFP15056 766 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 CYP3A7P24462 503 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 PSMA2P25787 234 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 MSH2P43246 934 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 CCNG1P51959 295 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 IL9RQ01113 521 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ANKRD20A2Q5SQ80 823 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ANKRD20A1Q5TYW2 823 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 KCTD6Q8NC69 237 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 LRRC8CQ8TDW0 803 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SYTL5Q8TDW5 730 aaPredicted RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 ATG4AQ8WYN0 398 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 TEX13BQ9BXU2 312 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 MAD1L1Q9Y6D9 718 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SCINQ9Y6U3 715 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 RASA4BC9J798 803 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 RASA4O43374 803 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 WFS1O76024 890 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 PECAM1P16284 738 aaPredicted RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 ARHGEF18Q6ZSZ5 1173 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 YIPF3Q9GZM5 350 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 TMEM8AQ9HCN3 771 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.08□□□□□ -0.64
RNF40-204ENST00000563683 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 ARAP2Q8WZ64 1704 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 TGFB1I1O43294 461 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 PSMD10O75832 226 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 HLA-DRAP01903 254 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 PHBP35232 272 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 DRG2P55039 364 aaKnown RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 PTENP60484 403 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 BNIP1Q12981 228 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
RNF40-204ENST00000563683 DGKZQ13574 1117 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 KYNUQ16719 465 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 XKR3Q5GH77 459 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 OR6B2Q6IFH4 312 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SLC30A9Q6PML9 568 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 SLFN11Q7Z7L1 901 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 RHOT1Q8IXI2 618 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms