RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 TMEM150BA6NC51 233 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 THAP12O43422 761 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 EXTL3O43909 919 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ATP9AO75110 1047 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ZBED4O75132 1171 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ATP2C2O75185 946 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 DGAT1O75907 488 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ACSL3O95573 720 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 CHKAP35790 457 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 CETN2P41208 172 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 SNX1Q13596 522 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 PSMD6Q15008 389 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 ARHGEF18Q6ZSZ5 1173 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 AGBL3Q8NEM8 1001 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 GRAMD1AQ96CP6 724 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 CEP170P1Q96L14 293 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 RAVER2Q9HCJ3 691 aaKnown RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.94□□□□□ -0.185e-9■■■■■ 51.3
USB1-207ENST00000563149 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
USB1-207ENST00000563149 TOPORSQ9NS56 1045 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
USB1-207ENST00000563149 NDC80O14777 642 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 CDH16O75309 829 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 ABHD2P08910 425 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 EZRP15311 586 aaKnown RBP13.93□□□□□ -0.18
USB1-207ENST00000563149 RRM1P23921 792 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 ADCY8P40145 1251 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 IFNAR2P48551 515 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 NEDD9Q14511 834 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 GALNTL6Q49A17 601 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
USB1-207ENST00000563149 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 MON1BQ7L1V2 547 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 KATNAL2Q8IYT4 538 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 NINJ2Q9NZG7 142 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 SCINQ9Y6U3 715 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
USB1-207ENST00000563149 A0A1B0GUA9 196 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 APBA3O96018 575 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 CCND2P30279 289 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 KYNUQ16719 465 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 ZACNQ401N2 412 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 CCDC38Q502W7 563 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
USB1-207ENST00000563149 PPP1R21Q6ZMI0 780 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 EXD1Q8NHP7 514 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 FAM212AQ96EL1 285 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 ARL2BPQ9Y2Y0 163 aa13.92□□□□□ -0.18
USB1-207ENST00000563149 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 TCP11X1B4DZS4 312 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 HNRNPDLO14979 420 aaKnown RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 STBD1O95210 358 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 GJB6O95452 261 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 ATP6V1G2O95670 118 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 C4BPAP04003 597 aaKnown RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 PSAPP07602 524 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 BRAFP15056 766 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 NR1H3Q13133 447 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 PHF13Q86YI8 300 aaPredicted RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 ANKRD35Q8N283 1001 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 FNBP1Q96RU3 617 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 FAM213AQ9BRX8 229 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 MTFR1LQ9H019 292 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 KCNK9Q9NPC2 374 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 STYXL1Q9Y6J8 313 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 NFASCO94856 1347 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 UMODL1Q5DID0 1318 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 C21orf2O43822 256 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 RAD17O75943 681 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 LDHAP00338 332 aaKnown RBP13.91□□□□□ -0.18
USB1-207ENST00000563149 HLA-DRAP01903 254 aa13.91□□□□□ -0.18
USB1-207ENST00000563149 RALAP11233 206 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms