RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM84BQ96KN1 310 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 RPGRIP1Q96KN7 1286 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 CLUHP3Q96NS8 147 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 TGS1Q96RS0 853 aaKnown RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 PLCD4Q9BRC7 762 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 MRIQ9BWK5 157 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 FTOQ9C0B1 505 aaKnown RBP eCLIP3.9□□□□□ -1.79
SPG11-225ENST00000561391 SLKQ9H2G2 1235 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 SFMBT1Q9UHJ3 866 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 MBD1Q9UIS9 605 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 NUDCQ9Y266 331 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 PCDHA9Q9Y5H5 950 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 PCDHA8Q9Y5H6 950 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 PHIPQ8WWQ0 1821 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 WDR87Q6ZQQ6 2873 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 SPTBN2O15020 2390 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 ELP1O95163 1332 aa3.9□□□□□ -1.79
SPG11-225ENST00000561391 EP300Q09472 2414 aaPredicted RBP3.9□□□□□ -1.79
SPG11-225ENST00000561391 PTPRFP10586 1907 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 A0A0U1RQG5 324 aaPredicted RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 A0A1B0GUL7 405 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 MYADML2A6NDP7 307 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 LOC730098B7Z3J9 87 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 C22orf46C9J442 243 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ENPP3O14638 875 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 PLD2O14939 933 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 NRDCO43847 1150 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 CRTAMO95727 393 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 CD4P01730 458 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 PROS1P07225 676 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ASGR1P07306 291 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 C6orf222P0C671 652 aaPredicted RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 MSL3P1P0C860 447 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ARP10275 920 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ACTN1P12814 892 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ADORA2AP29274 412 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 RGS3P49796 1198 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 GYS2P54840 703 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ERVK-21P61565 698 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 MVKQ03426 396 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 RRP1BQ14684 758 aaKnown RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 ANGPT1Q15389 498 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 CCDC184Q52MB2 194 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 CNKSR3Q6P9H4 555 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 RPAINQ86UA6 219 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 FAM177A1Q8N128 213 aaPredicted RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 LZTR1Q8N653 840 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 KLHDC9Q8NEP7 349 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 MRPL38Q96DV4 380 aaKnown RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 TRMT2BQ96GJ1 504 aaKnown RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 TMEM169Q96HH4 297 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 MAGEB10Q96LZ2 347 aaPredicted RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 CFAP53Q96M91 514 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 KCNJ15Q99712 375 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 TRPV6Q9H1D0 765 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 PNNQ9H307 717 aaKnown RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 SEMA4AQ9H3S1 761 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 MFSD1Q9H3U5 465 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 LUC7LQ9NQ29 371 aaKnown RBP3.89□□□□□ -1.79
SPG11-225ENST00000561391 GPR27Q9NS67 375 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 CTNNA3Q9UI47 895 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 ANGPTL2Q9UKU9 493 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.89□□□□□ -1.79
SPG11-225ENST00000561391 RABGAP1Q9Y3P9 1069 aa3.89□□□□□ -1.79
SPG11-225ENST00000561391 COL4A4P53420 1690 aaPredicted RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 ANKRD18BA2A2Z9 1011 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 AQP7O14520 342 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 N4BP3O15049 544 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 PI15O43692 258 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 STRNO43815 780 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 EFCAB14O75071 495 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 RASGRP1O95267 797 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 EFEMP2O95967 443 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 FPR2P25090 351 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 PPP2R1AP30153 589 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ARL4AP40617 200 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 BACE1P56817 501 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 GPR85P60893 370 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ZNF200P98182 395 aaPredicted RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 LSAMPQ13449 338 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 SMAD4Q13485 552 aaKnown RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 PTPROQ16827 1216 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 SOWAHCQ53LP3 525 aaPredicted RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 EGFLAMQ63HQ2 1017 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 CCSAPQ6IQ19 270 aaPredicted RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 LBX2Q6XYB7 198 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ZNF662Q6ZS27 426 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 MAMDC2Q7Z304 686 aaPredicted RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 BRAPQ7Z569 592 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 FGD2Q7Z6J4 655 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ZC3H7AQ8IWR0 971 aaKnown RBP3.88□□□□□ -1.79
SPG11-225ENST00000561391 SYNPOQ8N3V7 929 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 SHCBP1Q8NEM2 672 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 TBC1D22AQ8WUA7 517 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 MAML3Q96JK9 1138 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 FEZ1Q99689 392 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 C17orf80Q9BSJ5 609 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 RTKNQ9BST9 563 aa3.88□□□□□ -1.79
SPG11-225ENST00000561391 ALG1Q9BT22 464 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms