RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 CDKAL1Q5VV42 579 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 LIMS2Q7Z4I7 341 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 DDX53Q86TM3 631 aaKnown RBP13.11□□□□□ -0.31
IRF9-211ENST00000560852 TRIM59Q8IWR1 403 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
IRF9-211ENST00000560852 C11orf84Q9BUA3 381 aaPredicted RBP13.11□□□□□ -0.31
IRF9-211ENST00000560852 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
IRF9-211ENST00000560852 NKX2-4Q9H2Z4 354 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 ARMCX3Q9UH62 379 aaPredicted RBP13.11□□□□□ -0.31
IRF9-211ENST00000560852 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 IRAK3Q9Y616 596 aa13.11□□□□□ -0.31
IRF9-211ENST00000560852 SYCE3A1L190 88 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 STX10O60499 249 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 NFICP08651 508 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 KRT13P13646 458 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 ZNF18P17022 549 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 PNPLA4P41247 253 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 IQCB1Q15051 598 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 SPATA18Q8TC71 538 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 C18orf25Q96B23 403 aaPredicted RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 CHST7Q9NS84 486 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
IRF9-211ENST00000560852 PTPRJQ12913 1337 aa13.1□□□□□ -0.31
IRF9-211ENST00000560852 M0QZQ0 153 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 EEF1GP26641 437 aaKnown RBP13.09□□□□□ -0.31
IRF9-211ENST00000560852 ATICP31939 592 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 CLCNKBP51801 687 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 STX17P56962 302 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 RBP5P82980 135 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 MYL5Q02045 173 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 KRT17Q04695 432 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 GLRA4Q5JXX5 417 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
IRF9-211ENST00000560852 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 OR5B17Q8NGF7 314 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 TAF4BQ92750 862 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 TTYH1Q9H313 450 aaPredicted RBP13.09□□□□□ -0.31
IRF9-211ENST00000560852 FAM124BQ9H5Z6 455 aaPredicted RBP13.09□□□□□ -0.31
IRF9-211ENST00000560852 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 GDAP2Q9NXN4 497 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 SIX4Q9UIU6 781 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 ADAM28Q9UKQ2 775 aa13.09□□□□□ -0.31
IRF9-211ENST00000560852 SMTNL1A8MU46 457 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 PODXLO00592 558 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 LPXNO60711 386 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 LILRB3O75022 631 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
IRF9-211ENST00000560852 FGF18O76093 207 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 TNNC2P02585 160 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ITGB1P05556 798 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 TNNI1P19237 187 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ZNF165P49910 485 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 LILRA4P59901 499 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 DLG4P78352 724 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 CAMK1Q14012 370 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 KRT39Q6A163 491 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 DPH6Q7L8W6 267 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 KLHL23Q8NBE8 558 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 CCDC127Q96BQ5 260 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 SUSD3Q96L08 255 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
IRF9-211ENST00000560852 PAAF1Q9BRP4 392 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 ANP32EQ9BTT0 268 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 TUBGCP4Q9UGJ1 667 aa13.08□□□□□ -0.32
IRF9-211ENST00000560852 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms