RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TANGO2Q6ICL3 276 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 ANKS3Q6ZW76 656 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 APBB1IPQ7Z5R6 666 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 ZBTB44Q8NCP5 570 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 PLA2G2FQ9BZM2 168 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 CXCL16Q9H2A7 254 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 EPC1Q9H2F5 836 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 GOLGA2P5Q9HBQ8 144 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 ZFP14Q9HCL3 533 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 GDE1Q9NZC3 331 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 MAN2B1O00754 1011 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 FGFR3P22607 806 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 BRCC3P46736 316 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 RPS9P46781 194 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 YARSP54577 528 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 NRLP54845 237 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 OSTNP61366 133 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 SLC5A9Q2M3M2 681 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 EEF1DP3Q658K8 133 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 DNASE1L2Q92874 299 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 DDX27Q96GQ7 796 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 IFT74Q96LB3 600 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 UROC1Q96N76 676 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 RTKNQ9BST9 563 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 TRMT61BQ9BVS5 477 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 FZD8Q9H461 694 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 SLITRK6Q9H5Y7 841 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 NUB1Q9Y5A7 615 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
CDC42BPB-207ENST00000560492 ACKR2O00590 384 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 ZNF197O14709 1029 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 POU2F2P09086 479 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 MYL4P12829 197 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 GDI1P31150 447 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 MCM7P33993 719 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 NAMPTP43490 491 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 ROR1Q01973 937 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 FAM187BQ17R55 369 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 CYP4A22Q5TCH4 519 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 ATF7IP2Q5U623 682 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 CDCA2Q69YH5 1023 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 IQCEQ6IPM2 695 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 FAM3CQ92520 227 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 IRF7Q92985 503 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 CLDN23Q96B33 292 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 NACC1Q96RE7 527 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 KIFC3Q9BVG8 833 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 CCDC94Q9BW85 323 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 FAM126AQ9BYI3 521 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRMT8Q9NR22 394 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 GPR179Q6PRD1 2367 aa11.53□□□□□ -0.56
CDC42BPB-207ENST00000560492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 PFKFB2O60825 505 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 LILRB5O75023 590 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 MED24O75448 989 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 HARSP12081 509 aaKnown RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 XRCC6P12956 609 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 CPB1P15086 417 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 IGFBP6P24592 240 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 CCR3P51677 355 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 NAB2Q15742 525 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 ST3GAL2Q16842 350 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 PPM1JQ5JR12 505 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 FAM78AQ5JUQ0 283 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 RTL10Q7L3V2 364 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 CSGALNACT1Q8TDX6 532 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 BSNDQ8WZ55 320 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 ZNF512Q96ME7 567 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 LMAN1LQ9HAT1 526 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 POLD4Q9HCU8 107 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 TOPORSQ9NS56 1045 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 BACE2Q9Y5Z0 518 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 PIAS3Q9Y6X2 628 aa11.52□□□□□ -0.57
CDC42BPB-207ENST00000560492 MYH11P35749 1972 aa11.51□□□□□ -0.57
CDC42BPB-207ENST00000560492 WDR27A2RRH5 827 aa11.51□□□□□ -0.57
CDC42BPB-207ENST00000560492 CCDC169A6NNP5 214 aa11.51□□□□□ -0.57
CDC42BPB-207ENST00000560492 BTBD18B2RXH4 712 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms