RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 VITQ6UXI7 678 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 THSD4Q6ZMP0 1018 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 TAS1R1Q7RTX1 841 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 RALGPS2Q86X27 583 aaPredicted RBP7.35□□□□□ -1.23
HERC1-208ENST00000560462 IL31RAQ8NI17 732 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 DEPDC1BQ8WUY9 529 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 TRAPPC12Q8WVT3 735 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
HERC1-208ENST00000560462 TNPO1Q92973 898 aaKnown RBP7.35□□□□□ -1.23
HERC1-208ENST00000560462 OSMRQ99650 979 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 MEIS3Q99687 375 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 MTRQ99707 1265 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 CHST12Q9NRB3 414 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 HCFC1R1Q9NWW0 138 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 EBF1Q9UH73 591 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 SLC6A14Q9UN76 642 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 AK5Q9Y6K8 562 aa7.35□□□□□ -1.23
HERC1-208ENST00000560462 SPENQ96T58 3664 aaKnown RBP7.35□□□□□ -1.23
HERC1-208ENST00000560462 ZMYM6O95789 1325 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 MYBPHLA2RUH7 354 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 ARNTLO00327 626 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 SUV39H1O43463 412 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
HERC1-208ENST00000560462 APBB3O95704 486 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 ALDH2P05091 517 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 BCKDHBP21953 392 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 MPSTP25325 297 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 DGKEP52429 567 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 CRYBB1P53674 252 aaPredicted RBP7.34□□□□□ -1.23
HERC1-208ENST00000560462 EPHA4P54764 986 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 DSG1Q02413 1049 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 KIZQ2M2Z5 673 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 NOMO2Q5JPE7 1267 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 BROXQ5VW32 411 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 FGF11Q92914 225 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 GAD1Q99259 594 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 SMARCAD1Q9H4L7 1026 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 IL21Q9HBE4 155 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 CPNE5Q9HCH3 593 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.34□□□□□ -1.23
HERC1-208ENST00000560462 POLR3BQ9NW08 1133 aaPredicted RBP7.34□□□□□ -1.23
HERC1-208ENST00000560462 FBXW11Q9UKB1 542 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 INPP5FQ9Y2H2 1132 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
HERC1-208ENST00000560462 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 SPATA31C2B4DYI2 1134 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 GOLIM4O00461 696 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 CBFA2T3O75081 653 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 SERPINF2P08697 491 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 ATXN1LP0C7T5 689 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 CEBPBP17676 345 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 VARSP26640 1264 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 GRNP28799 593 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 HOXD12P35452 270 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 ADD2P35612 726 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 SCTRP47872 440 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 GDF10P55107 478 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 NFKB2Q00653 900 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 TLE1Q04724 770 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 SMAD1Q15797 465 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 DUOXA1Q1HG43 343 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 INTS6LQ5JSJ4 861 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 RRP12Q5JTH9 1297 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 MTHFD1LQ6UB35 978 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 STOX1Q6ZVD7 989 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 ARMCX6Q7L4S7 300 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 LPCAT2Q7L5N7 544 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 ZC3H18Q86VM9 953 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 TICAM1Q8IUC6 712 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 CEP76Q8TAP6 659 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 TMEM176AQ96HP8 235 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 MBOAT7Q96N66 472 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 LGMNQ99538 433 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 CSRNP2Q9H175 543 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 FNIP2Q9P278 1114 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 DNMT3BQ9UBC3 853 aaKnown RBP7.33□□□□□ -1.24
HERC1-208ENST00000560462 CRYBG3Q68DQ2 2970 aa7.33□□□□□ -1.24
HERC1-208ENST00000560462 DOCK6Q96HP0 2047 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 PNMA6EA0A0J9YXQ4 647 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 NRG2O14511 850 aaPredicted RBP7.32□□□□□ -1.24
HERC1-208ENST00000560462 NRP1O14786 923 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 FIBPO43427 364 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 NMT2O60551 498 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 POU2F2P09086 479 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 PTGER3P43115 390 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 HSD17B4P51659 736 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 CREMQ03060 361 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 GRM4Q14833 912 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 SLC5A9Q2M3M2 681 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 MFSD6LQ8IWD5 586 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 YAF2Q8IY57 180 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 KIAA0319LQ8IZA0 1049 aa7.32□□□□□ -1.24
HERC1-208ENST00000560462 SETD7Q8WTS6 366 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms