RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CTTNBP2NLQ9P2B4 639 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SUCLA2Q9P2R7 463 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 DENND2AQ9ULE3 1009 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 CYP8B1Q9UNU6 501 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 ARL2BPQ9Y2Y0 163 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 UTP11Q9Y3A2 253 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 BZW2Q9Y6E2 419 aaKnown RBP6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TNKSO95271 1327 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 SPATA31A3Q5VYP0 1347 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TNS2Q63HR2 1409 aa6.41□□□□□ -1.38
SNRPA1-209ENST00000560307 TNRC6CQ9HCJ0 1690 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ESYT3A0FGR9 886 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ZSCAN5CA6NGD5 496 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 C9orf172C9J069 976 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 UBE2Q2LH0YL09 131 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SLC26A4O43511 780 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 GRIN3BO60391 1043 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 UBOX5O94941 541 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 MBD4O95243 580 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 EYA4O95677 639 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 A1BGP04217 495 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PLEKP08567 350 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SETSIPP0DME0 302 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SCG2P13521 617 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PEX19P40855 299 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 UBA7P41226 1012 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SLC1A4P43007 532 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 CTCFP49711 727 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 KLK7P49862 253 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PCBP4P57723 403 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 JAG1P78504 1218 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 CLCQ05315 142 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 IFIT5Q13325 482 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 CUL3Q13618 768 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ZRSR2Q15696 482 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PCSK7Q16549 785 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 IL17AQ16552 155 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PFKFB3Q16875 520 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 TDRD12Q587J7 1177 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ZC3H12AQ5D1E8 599 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 METTL24Q5JXM2 366 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 WASHC2DQ5SRD0 308 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 DENND2CQ68D51 928 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 UNC13DQ70J99 1090 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 RRAGAQ7L523 313 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SYT9Q86SS6 491 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 FAM35AQ86V20 835 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PNMA8AQ86V59 439 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 TBC1D16Q8TBP0 767 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 FBXO41Q8TF61 875 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 NUP133Q8WUM0 1156 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 LZICQ8WZA0 190 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ANKS1AQ92625 1134 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 STAMQ92783 540 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 KLHL29Q96CT2 875 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ZBTB10Q96DT7 871 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC3Q9BY71 257 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PUS3Q9BZE2 481 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 TRIM9Q9C026 710 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 YIPF3Q9GZM5 350 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 FAM192AQ9GZU8 254 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 ADAM7Q9H2U9 754 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 KANSL2Q9H9L4 492 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 RNPEPL1Q9HAU8 725 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 PANK4Q9NVE7 773 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SMARCAL1Q9NZC9 954 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 WDR35Q9P2L0 1181 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 RASAL2Q9UJF2 1139 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 STXBP5LQ9Y2K9 1186 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 DAAM1Q9Y4D1 1078 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 SLC4A7Q9Y6M7 1214 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 WNK3Q9BYP7 1800 aa6.4□□□□□ -1.38
SNRPA1-209ENST00000560307 FLT1P17948 1338 aa6.4□□□□□ -1.39
SNRPA1-209ENST00000560307 PCDH11XQ9BZA7 1347 aa6.4□□□□□ -1.39
SNRPA1-209ENST00000560307 MEGF6O75095 1541 aa6.4□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM221AA4D161 298 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 ENO4A6NNW6 628 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 RGS16O15492 202 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 PDPK1O15530 556 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 BUB1O43683 1085 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 DNAJC6O75061 913 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 SMIM24O75264 130 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 CILPO75339 1184 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 SKAP2O75563 359 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 GGPS1O95749 300 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 PENKP01210 267 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 GNAT1P11488 350 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 IMPDH2P12268 514 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 SLC5A1P13866 664 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 PTPRAP18433 802 aa6.39□□□□□ -1.39
SNRPA1-209ENST00000560307 ALAS2P22557 587 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms