RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 SCAPQ12770 1279 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 CT83Q5H943 113 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 GPR149Q86SP6 731 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 RASSF3Q86WH2 238 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 TMEM132CQ8N3T6 1108 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 APPBP2Q92624 585 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 ALOXE3Q9BYJ1 711 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 REXO4Q9GZR2 422 aaKnown RBP4.82□□□□□ -1.64
LRRC28-218ENST00000560236 KLHL11Q9NVR0 708 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 CLTCQ00610 1675 aaKnown RBP4.82□□□□□ -1.64
LRRC28-218ENST00000560236 DNMT1P26358 1616 aaKnown RBP4.82□□□□□ -1.64
LRRC28-218ENST00000560236 VWDEQ8N2E2 1590 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 PLCH2O75038 1416 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 CXorf49A8MYA2 514 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-218ENST00000560236 ELANEP08246 267 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 RAP2BP61225 183 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF169Q14929 603 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-218ENST00000560236 MST1LQ2TV78 715 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF362Q5T0B9 420 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-218ENST00000560236 SP5Q6BEB4 398 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-218ENST00000560236 MED25Q71SY5 747 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 REPS2Q8NFH8 660 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 FANCLQ9NW38 375 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 DEPDC5O75140 1603 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 ABCA6Q8N139 1617 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 XIRP1Q702N8 1843 aaKnown RBP4.81□□□□□ -1.64
LRRC28-218ENST00000560236 MLH3Q9UHC1 1453 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 STRCP1A6NGW2 1772 aa4.81□□□□□ -1.64
LRRC28-218ENST00000560236 NEURL4Q96JN8 1562 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 AKR1B10O60218 316 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 IGLV2-14P01704 120 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 ADSLP30566 484 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 UGT8Q16880 541 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 ATP13A4Q4VNC1 1196 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 RRP12Q5JTH9 1297 aaKnown RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 EFCAB2Q5VUJ9 269 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 B3GNTL1Q67FW5 361 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 Q6ZNX1 250 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF572Q7Z3I7 529 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 TRMT2AQ8IZ69 625 aaKnown RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 EAF2Q96CJ1 260 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 RNF31Q96EP0 1072 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 FUBP3Q96I24 572 aaKnown RBP eCLIP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 ZSWIM1Q9BR11 485 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 FRMD4BQ9Y2L6 1034 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 CDK12Q9NYV4 1490 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-218ENST00000560236 IQGAP1P46940 1657 aa4.8□□□□□ -1.64
LRRC28-218ENST00000560236 SAMD9Q5K651 1589 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 PNPLA7Q6ZV29 1317 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 LRRC7Q96NW7 1537 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 ALOX15P16050 662 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-218ENST00000560236 RARRES1P49788 294 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 OCA2Q04671 838 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 PDCD1Q15116 288 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 FSCN1Q16658 493 aaKnown RBP4.79□□□□□ -1.64
LRRC28-218ENST00000560236 PAPD7Q5XG87 772 aaKnown RBP4.79□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF772Q68DY9 489 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-218ENST00000560236 FBXO18Q8NFZ0 1043 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 LEO1Q8WVC0 666 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-218ENST00000560236 RNPEPQ9H4A4 650 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 PIF1Q9H611 641 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 CASS4Q9NQ75 786 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 DPP7Q9UHL4 492 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 PLAAQ9Y263 795 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 A2ML1A8K2U0 1454 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 MED14O60244 1454 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 FAM135BQ49AJ0 1406 aa4.79□□□□□ -1.64
LRRC28-218ENST00000560236 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 CDK13Q14004 1512 aaKnown RBP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 ITSN2Q9NZM3 1697 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 CXADRP78310 365 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 MRPS35P82673 323 aaKnown RBP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 CDK17Q00537 523 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 EPHA10Q5JZY3 1008 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 ARHGEF25Q86VW2 580 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 GPR156Q8NFN8 814 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 OR7D4Q8NG98 312 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF384Q8TF68 577 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 RIN2Q8WYP3 895 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 FUBP1Q96AE4 644 aaKnown RBP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 MFSD3Q96ES6 412 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 RAX2Q96IS3 184 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 MRI1Q9BV20 369 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 BCO1Q9HAY6 547 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 GALNT9Q9HCQ5 603 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 TOPORSQ9NS56 1045 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-218ENST00000560236 SEMA4GQ9NTN9 838 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 LRIT1Q9P2V4 623 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 ATRNL1Q5VV63 1379 aa4.78□□□□□ -1.64
LRRC28-218ENST00000560236 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 ROBO1Q9Y6N7 1651 aa4.77□□□□□ -1.65
LRRC28-218ENST00000560236 NUP153P49790 1475 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms