RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MOSPD3O75425 235 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 DGAT1O75907 488 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 LRG1P02750 347 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 C1QTNF9P0C862 333 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 ROR1Q01973 937 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 ACAP1Q15027 740 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 STPG1Q5TH74 334 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 NCAPH2Q6IBW4 605 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 Q6ZS52 159 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 CEP68Q76N32 757 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 TPH2Q8IWU9 490 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 FBXL16Q8N461 479 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 ZNF461Q8TAF7 563 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 DEPDC1BQ8WUY9 529 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 ARRDC1-AS1Q9H2J1 176 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 ZMIZ1Q9ULJ6 1067 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 FLNBO75369 2602 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 I3L4J1 428 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 ZNF197O14709 1029 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 ZNF263O14978 683 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 B3GAT3O94766 335 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 ABLIM3O94929 683 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 SLITRK3O94933 977 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 KCNK5O95279 499 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 ZNF806P0C7X5 589 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 LRRC32Q14392 662 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 PPP4R3AQ6IN85 833 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 KRT25Q7Z3Z0 450 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 C12orf50Q8NA57 414 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 LSM14BQ9BX40 385 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 AGXT2Q9BYV1 514 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 PDZD7Q9H5P4 517 aa14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 PRMT7Q9NVM4 692 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-213ENST00000560127 PRRG1O14668 218 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 TBX3O15119 743 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 SEC24AO95486 1093 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 PDIA3P30101 505 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 HOXA6P31267 233 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 ELF1P32519 619 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 BRCC3P46736 316 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 CLCNKBP51801 687 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 FAM187BQ17R55 369 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 TXNDC11Q6PKC3 985 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 UNQ6494/PRO21346Q6UXR6 183 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 PDZD4Q76G19 769 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 NEK8Q86SG6 692 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 WDR5BQ86VZ2 330 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 MFSD6LQ8IWD5 586 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 TCEAL8Q8IYN2 117 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 C3orf58Q8NDZ4 430 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 KCNB2Q92953 911 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 PRIMPOLQ96LW4 560 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 FZD8Q9H461 694 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 TRPV4Q9HBA0 871 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 FREM2Q5SZK8 3169 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 THADAQ6YHU6 1953 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 SMG1Q96Q15 3661 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 LOC400499M0QZD8 3231 aa14.14□□□□□ -0.15
RABGGTA-213ENST00000560127 DENND4CQ5VZ89 1909 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 IGSF10Q6WRI0 2623 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 LRRIQ4A6NIV6 560 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 HEPACAM2A8MVW5 462 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 N4BP3O15049 544 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 EPN2O95208 641 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 LYPLA2O95372 231 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 ATF2P15336 505 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 GCFC2P16383 781 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 GJA1P17302 382 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 RAP1GAPP47736 663 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 SOX9P48436 509 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 RARRES1P49788 294 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 EVCP57679 992 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 SSRP1Q08945 709 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 UPP1Q16831 310 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 GLRA4Q5JXX5 417 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 CYP4A22Q5TCH4 519 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 CDCA2Q69YH5 1023 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 BLOC1S2Q6QNY1 142 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 POTEDQ86YR6 584 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 KDF1Q8NAX2 398 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 ZSCAN18Q8TBC5 510 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 RSPRY1Q96DX4 576 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 MSANTD3Q96H12 275 aa14.13□□□□□ -0.15
RABGGTA-213ENST00000560127 LOXL4Q96JB6 756 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms