RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 LACTBL1A8MY62 500 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 CLDN3O15551 220 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 TBC1D4O60343 1298 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 FAM13AO94988 1023 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 CREMQ03060 361 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 ELAVL2Q12926 359 aaKnown RBP19.36■□□□□ 0.69
HDDC3-205ENST00000559898 PPM1LQ5SGD2 360 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 VARS2Q5ST30 1063 aaKnown RBP19.36■□□□□ 0.69
HDDC3-205ENST00000559898 AXDND1Q5T1B0 1012 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-205ENST00000559898 DYMQ7RTS9 669 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 APBB1IPQ7Z5R6 666 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-205ENST00000559898 KCTD17Q8N5Z5 321 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 RASSF8Q8NHQ8 419 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 ITFG1Q8TB96 612 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 FGFBP2Q9BYJ0 223 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 RHOBTB2Q9BYZ6 727 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 PANK2Q9BZ23 570 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 FAM86C1Q9NVL1 165 aa19.36■□□□□ 0.69
HDDC3-205ENST00000559898 LARSQ9P2J5 1176 aaKnown RBP19.36■□□□□ 0.69
HDDC3-205ENST00000559898 WDR27A2RRH5 827 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 MYMKA6NI61 221 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 SLC26A4O43511 780 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 PI15O43692 258 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 TRAK2O60296 914 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 BMP15O95972 392 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 NPR3P17342 541 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 DDIT3P35638 169 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 ARPP19P56211 112 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 ROR1Q01973 937 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 TDGQ13569 410 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 ENOX2Q16206 610 aaKnown RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 CWF19L1Q69YN2 538 aaKnown RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 ZSWIM2Q8NEG5 633 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 PARVGQ9HBI0 331 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 EPS15L1Q9UBC2 864 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 DNMT3BQ9UBC3 853 aaKnown RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 POLIQ9UNA4 740 aa19.35■□□□□ 0.69
HDDC3-205ENST00000559898 SRPRBQ9Y5M8 271 aaKnown RBP19.35■□□□□ 0.69
HDDC3-205ENST00000559898 SEC24AO95486 1093 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 C1RP00736 705 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 PIGRP01833 764 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 KRT18P05783 430 aaKnown RBP19.34■□□□□ 0.69
HDDC3-205ENST00000559898 LAMP2P13473 410 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 LIG4P49917 911 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 KCNA1Q09470 495 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 MRPL58Q14197 206 aaKnown RBP19.34■□□□□ 0.69
HDDC3-205ENST00000559898 ZBTB6Q15916 424 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 SFR1Q86XK3 245 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 KIF12Q96FN5 646 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 SLC38A7Q9NVC3 462 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 DPP7Q9UHL4 492 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 DUSP12Q9UNI6 340 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 TIMM13Q9Y5L4 95 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-205ENST00000559898 BACE2Q9Y5Z0 518 aa19.34■□□□□ 0.69
HDDC3-205ENST00000559898 TSC2P49815 1807 aa19.33■□□□□ 0.69
HDDC3-205ENST00000559898 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
HDDC3-205ENST00000559898 CFHP08603 1231 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 PDCP20941 246 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 FSHRP23945 695 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 GTF2BQ00403 316 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 LIN9Q5TKA1 542 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 SCARA3Q6AZY7 606 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 PARM1Q6UWI2 310 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 CYP26C1Q6V0L0 522 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 SLC44A3Q8N4M1 653 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 ING5Q8WYH8 240 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 KCNN1Q92952 543 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 DNAJC19Q96DA6 116 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 INTS4Q96HW7 963 aaKnown RBP19.33■□□□□ 0.68
HDDC3-205ENST00000559898 FAM84AQ96KN4 292 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 FBXL5Q9UKA1 691 aa19.33■□□□□ 0.68
HDDC3-205ENST00000559898 SCN1AP35498 2009 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 A0A0B4J269 797 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 KRBA1A5PL33 1030 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 STX6O43752 255 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 VNN2O95498 520 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 CLTAP09496 248 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 OR4Q2P0C623 313 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 MCM4P33991 863 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 ACOT2P49753 483 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 CDR1P51861 262 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 CASP5P51878 434 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 WNT7BP56706 349 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 HTR4Q13639 388 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 SLC5A9Q2M3M2 681 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 ANKS3Q6ZW76 656 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 MAP4K3Q8IVH8 894 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 DDX12PQ92771 950 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 STAMQ92783 540 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 FGF14Q92915 247 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 FAM212AQ96EL1 285 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 SUSD3Q96L08 255 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 TFIP11Q9UBB9 837 aaKnown RBP19.32■□□□□ 0.68
HDDC3-205ENST00000559898 NUB1Q9Y5A7 615 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 NUMBLQ9Y6R0 609 aa19.32■□□□□ 0.68
HDDC3-205ENST00000559898 ANHXE9PGG2 379 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms