RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PSMA2P25787 234 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 SOX5P35711 763 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 APLP1P51693 650 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 DYNLT1P63172 113 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 MYH14Q7Z406 1995 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 COL22A1Q8NFW1 1626 aaPredicted RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 ACTN3Q08043 901 aaPredicted RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 TSNAXIP1Q2TAA8 658 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 CCDC14Q49A88 953 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 UHMK1Q8TAS1 419 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 SPATS2LQ9NUQ6 558 aaKnown RBP11.32□□□□□ -0.6
CARMIL3-202ENST00000559694 GARTP22102 1010 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 PPP6R3Q5H9R7 873 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 FAM49BQ9NUQ9 324 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 PIK3R2O00459 728 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ATP5DP30049 168 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 VEPH1Q14D04 833 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CLUL1Q15846 466 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 UAP1Q16222 522 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CCDC38Q502W7 563 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CROCCP2Q86T23 111 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CCDC197Q8NCU1 140 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ZBTB45Q96K62 511 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SCINQ9Y6U3 715 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 NFASCO94856 1347 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 IFNAR2P48551 515 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CENPPQ6IPU0 288 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 RNPEPQ9H4A4 650 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 KRT1P04264 644 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 EIF4BP23588 611 aaKnown RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 AKAP5P24588 427 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 GRIK1P39086 918 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ARL1P40616 181 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CCL23P55773 120 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 CORO7P57737 925 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 GPC5P78333 572 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 IL17AQ16552 155 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 AMHR2Q16671 573 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 SAPCD2Q86UD0 394 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 STMN2Q93045 179 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 HAUS1Q96CS2 278 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 STK33Q9BYT3 514 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ZWILCHQ9H900 591 aa11.31□□□□□ -0.6
CARMIL3-202ENST00000559694 ITGB4P16144 1822 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 GPR25O00155 361 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 ACKR2O00590 384 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 AKAP3O75969 853 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 CCNE2O96020 404 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 THP07101 528 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 CXCL8P10145 99 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 RGS7P49802 495 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 TAF6P49848 677 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 RHOT2Q8IXI1 618 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 SPIRE2Q8WWL2 714 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 HTRA3P83110 453 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 UGCGQ16739 394 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 SV2CQ496J9 727 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms