RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF568Q3ZCX4 644 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 SLC8B1Q6J4K2 584 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 TAS1R3Q7RTX0 852 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 MAML2Q8IZL2 1156 aaPredicted RBP14.37□□□□□ -0.11
TPM1-220ENST00000559556 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 CCDC94Q9BW85 323 aaPredicted RBP14.37□□□□□ -0.11
TPM1-220ENST00000559556 OSBPL6Q9BZF3 934 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 SLC38A7Q9NVC3 462 aa14.37□□□□□ -0.11
TPM1-220ENST00000559556 NOL7Q9UMY1 257 aaKnown RBP14.37□□□□□ -0.11
TPM1-220ENST00000559556 MYH10P35580 1976 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 WDR27A2RRH5 827 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 I3L4J1 428 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 ABLIM1O14639 778 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 LRRN2O75325 713 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 ABLIM3O94929 683 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 PROZP22891 400 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.114e-8■■■■■ 35.5
TPM1-220ENST00000559556 MAGEA9P43362 315 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 BRCC3P46736 316 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
TPM1-220ENST00000559556 PEX3P56589 373 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 DMP1Q13316 513 aaPredicted RBP14.36□□□□□ -0.11
TPM1-220ENST00000559556 GNL2Q13823 731 aaKnown RBP14.36□□□□□ -0.11
TPM1-220ENST00000559556 NBR1Q14596 966 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 SLC5A9Q2M3M2 681 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 ZNF528Q3MIS6 628 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 ZNF461Q8TAF7 563 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 KCNG4Q8TDN1 519 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 ING5Q8WYH8 240 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
TPM1-220ENST00000559556 RAB34Q9BZG1 259 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 PPP4R2Q9NY27 417 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 GDE1Q9NZC3 331 aa14.36□□□□□ -0.11
TPM1-220ENST00000559556 MRPS23Q9Y3D9 190 aaKnown RBP14.36□□□□□ -0.11
TPM1-220ENST00000559556 CCDC169A6NNP5 214 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 LAD1O00515 517 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 PODXLO00592 558 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 SYN3O14994 580 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 TBC1D4O60343 1298 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 HIP1RO75146 1068 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 ECI2O75521 394 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 SEC24BO95487 1268 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 RHOP08100 348 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 MCF2P10911 925 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 KCNE1P15382 129 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
TPM1-220ENST00000559556 MAPK7Q13164 816 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 PTGDRQ13258 359 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 SLC44A4Q53GD3 710 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
TPM1-220ENST00000559556 TCEAL8Q8IYN2 117 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 DRC1Q96MC2 740 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
TPM1-220ENST00000559556 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 LTB4R2Q9NPC1 389 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
TPM1-220ENST00000559556 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 FBXO4Q9UKT5 387 aa14.35□□□□□ -0.11
TPM1-220ENST00000559556 RBM19Q9Y4C8 960 aaKnown RBP14.35□□□□□ -0.11
TPM1-220ENST00000559556 E9PMD0 336 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 LRG1P02750 347 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 ATF2P15336 505 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 CEBPBP17676 345 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 PTPN2P17706 415 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 PRPHP41219 470 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 OSTNP61366 133 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 MRPL58Q14197 206 aaKnown RBP14.34□□□□□ -0.11
TPM1-220ENST00000559556 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 POTEHQ6S545 545 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 MPZL3Q6UWV2 235 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 SUMF1Q8NBK3 374 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
TPM1-220ENST00000559556 ACAP3Q96P50 834 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
TPM1-220ENST00000559556 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 DNM3Q9UQ16 869 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 MTF2Q9Y483 593 aaPredicted RBP14.34□□□□□ -0.11
TPM1-220ENST00000559556 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
TPM1-220ENST00000559556 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
TPM1-220ENST00000559556 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 PRRG1O14668 218 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 SPTLC1O15269 473 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 MEFVO15553 781 aaPredicted RBP14.33□□□□□ -0.12
TPM1-220ENST00000559556 FCARP24071 287 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 RPL9P32969 192 aaKnown RBP14.33□□□□□ -0.12
TPM1-220ENST00000559556 KRT79Q5XKE5 535 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 TPGS2Q68CL5 300 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 TPRG1Q6ZUI0 275 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 C1orf186Q6ZWK4 172 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 RUBCNQ92622 972 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 DNASE1L2Q92874 299 aa14.33□□□□□ -0.12
TPM1-220ENST00000559556 CLDN23Q96B33 292 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms