RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ACSF2Q96CM8 615 aaPredicted RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 DRC1Q96MC2 740 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 UROC1Q96N76 676 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PLIN2Q99541 437 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PRRX2Q99811 253 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 REEP2Q9BRK0 252 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ADPGKQ9BRR6 497 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 TIPINQ9BVW5 301 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 MRPL4Q9BYD3 311 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 RAB34Q9BZG1 259 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 FAM86C1Q9NVL1 165 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 HCFC1R1Q9NWW0 138 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 DLGAP2Q9P1A6 1054 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 IGSF9Q9P2J2 1179 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 DNMT3BQ9UBC3 853 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 WNT16Q9UBV4 365 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 DPP7Q9UHL4 492 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 CDY1Q9Y6F8 540 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 KIAA1549LQ6ZVL6 1849 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 TTC26A0AVF1 554 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ARHGEF37A1IGU5 675 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 WDR27A2RRH5 827 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 H0Y858 1186 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 PODXLO00592 558 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 TOM1L1O75674 476 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 B3GAT3O94766 335 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SEC24AO95486 1093 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 PIGRP01833 764 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 C8AP07357 584 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 CFHP08603 1231 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SRFP11831 508 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 FOXK2Q01167 660 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ROR1Q01973 937 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 MCL1Q07820 350 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ELAVL2Q12926 359 aaKnown RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 DMP1Q13316 513 aaPredicted RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SLC5A9Q2M3M2 681 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 UVSSAQ2YD98 709 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF568Q3ZCX4 644 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 PRSS36Q5K4E3 855 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 VARS2Q5ST30 1063 aaKnown RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 LARP1BQ659C4 914 aaKnown RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 MCTP1Q6DN14 999 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 PARM1Q6UWI2 310 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 HAUS6Q7Z4H7 955 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 GRASPQ7Z6J2 395 aaPredicted RBP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SPRYD3Q8NCJ5 442 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF461Q8TAF7 563 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SLC7A14Q8TBB6 771 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 GPR152Q8TDT2 470 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 FGF13Q92913 245 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 AK8Q96MA6 479 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ACAP3Q96P50 834 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 STRA6Q9BX79 667 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 IKZF4Q9H2S9 585 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 SLC2A4RGQ9NR83 387 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMAD3-209ENST00000558894 KCND2Q9NZV8 630 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 TUBGCP4Q9UGJ1 667 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 PTPRDP23468 1912 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 ANAPC1Q9H1A4 1944 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 MYO16Q9Y6X6 1858 aa6.07□□□□□ -1.44
SMAD3-209ENST00000558894 CACNA1IQ9P0X4 2223 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 MAST4O15021 2626 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 TISP43B9A030 160 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ANKRD63C9JTQ0 380 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 M0QZQ0 153 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PPEF2O14830 753 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SPTLC1O15269 473 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CCL16O15467 120 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SLC26A4O43511 780 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 MOSPD3O75425 235 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PPP1R37O75864 691 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CXCL8P10145 99 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 GLULP15104 373 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ATF2P15336 505 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 PLCG1P19174 1290 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 FSHRP23945 695 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 FCARP24071 287 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 LRPAP1P30533 357 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 RPL9P32969 192 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 NBL1P41271 181 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 CCR2P41597 374 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 AARSP49588 968 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 MCM2P49736 904 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 GPC5P78333 572 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 GTF2BQ00403 316 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SPAG1Q07617 926 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 RESTQ13127 1097 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 MCM6Q14566 821 aa6.06□□□□□ -1.44
SMAD3-209ENST00000558894 NOLC1Q14978 699 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 KARSQ15046 597 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 SF3A1Q15459 793 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ZRSR1Q15695 479 aaKnown RBP6.06□□□□□ -1.44
SMAD3-209ENST00000558894 ENOX2Q16206 610 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms