RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 IFRD1O00458 451 aaPredicted RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 ZNF623O75123 536 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 MALP21145 153 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 GUCY1A2P33402 732 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 CTXN1P60606 82 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 NKX6-1P78426 367 aaPredicted RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 CREMQ03060 361 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 TARDBPQ13148 414 aaKnown RBP eCLIP5.46□□□□□ -1.54
CASC4-206ENST00000558847 LONRF1Q17RB8 773 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 KHDC1Q4VXA5 237 aaKnown RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 TCTN3Q6NUS6 607 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 TRMT2AQ8IZ69 625 aaKnown RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 MSL3Q8N5Y2 521 aaKnown RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 ENAHQ8N8S7 591 aaPredicted RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 IFI44Q8TCB0 444 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 APIPQ96GX9 242 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 ZNF341Q9BYN7 854 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 BHMT2Q9H2M3 363 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 SIDT1Q9NXL6 827 aaKnown RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 ABCF2Q9UG63 623 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 PUF60Q9UHX1 559 aaKnown RBP5.46□□□□□ -1.54
CASC4-206ENST00000558847 SIK3Q9Y2K2 1263 aa5.46□□□□□ -1.54
CASC4-206ENST00000558847 ZKSCAN1P17029 563 aaPredicted RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 PTPN7P35236 360 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 ACVRL1P37023 503 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 TM4SF4P48230 202 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 FLT3LGP49771 235 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 ADCY7P51828 1080 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 NPEPPSP55786 919 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 MTM1Q13496 603 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 ZRSR2Q15696 482 aaKnown RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 HS1BP3Q53T59 392 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 SPDYAQ5MJ70 313 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 ZNF572Q7Z3I7 529 aaPredicted RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 GPR135Q8IZ08 494 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 CMTM4Q8IZR5 234 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 RABGGTAQ92696 567 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 CCDC138Q96M89 665 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 NAA15Q9BXJ9 866 aaKnown RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 KIAA1586Q9HCI6 787 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 PIH1D1Q9NWS0 290 aaKnown RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 ING3Q9NXR8 418 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 AJAP1Q9UKB5 411 aaPredicted RBP5.45□□□□□ -1.54
CASC4-206ENST00000558847 PADI4Q9UM07 663 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 PCDHGB6Q9Y5F9 930 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
CASC4-206ENST00000558847 RHPN2P1A8MT19 583 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 SLC26A4O43511 780 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 FOXS1O43638 330 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 GNAI3P08754 354 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 MTHFD1P11586 935 aaKnown RBP5.44□□□□□ -1.54
CASC4-206ENST00000558847 MYF5P13349 255 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 SLC5A1P13866 664 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 CR2P20023 1033 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 GZMKP49863 264 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 GNAI1P63096 354 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 ATP8B2P98198 1209 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 PLS1Q14651 629 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 APOA5Q6Q788 366 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 SRLQ86TD4 932 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 TAX1BP1Q86VP1 789 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 ANKRD53Q8N9V6 530 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 OR5M3Q8NGP4 307 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 PHKBQ93100 1093 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 IL17RAQ96F46 866 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 PLA2G12BQ9BX93 195 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 TAGLN3Q9UI15 199 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 OGDHLQ9ULD0 1010 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 SLC30A1Q9Y6M5 507 aa5.44□□□□□ -1.54
CASC4-206ENST00000558847 RASA4BC9J798 803 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 RASA4O43374 803 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 CDC14BO60729 498 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 RAD17O75943 681 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 AMY1AP04745 511 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 SETSIPP0DME0 302 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 ALDH5A1P51649 535 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 ATP2C1P98194 919 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 SNAPC2Q13487 334 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 KRT72Q14CN4 511 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 FAM47AQ5JRC9 791 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 PRAMEF14Q5SWL7 426 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 OTUD7BQ6GQQ9 843 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 PLXDC1Q8IUK5 500 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 GIMAP8Q8ND71 665 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 NLGN4YQ8NFZ3 816 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 DEPTORQ8TB45 409 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 ANKS1AQ92625 1134 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 DMRTA2Q96SC8 542 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 GPHA2Q96T91 129 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 VRK1Q99986 396 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 C22orf23Q9BZE7 217 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 UNKQ9C0B0 810 aaKnown RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 C11orf54Q9H0W9 315 aaPredicted RBP5.43□□□□□ -1.54
CASC4-206ENST00000558847 SLITRK6Q9H5Y7 841 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 ARMT1Q9H993 441 aa5.43□□□□□ -1.54
CASC4-206ENST00000558847 AGO3Q9H9G7 860 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms