RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 HYAL1Q12794 435 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
LRRC28-206ENST00000558471 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 SKIV2LQ15477 1246 aaKnown RBP13.55□□□□□ -0.24
LRRC28-206ENST00000558471 SNRNP35Q16560 246 aaKnown RBP13.55□□□□□ -0.24
LRRC28-206ENST00000558471 RBM23Q86U06 439 aaKnown RBP13.55□□□□□ -0.24
LRRC28-206ENST00000558471 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 TLE6Q9H808 572 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 PRDM6Q9NQX0 595 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 CHST7Q9NS84 486 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 C2CD2Q9Y426 696 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 SCN1AP35498 2009 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 C2orf71A6NGG8 1288 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 GOLGA6L22H0YM25 854 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BIN1O00499 593 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 CALUO43852 315 aaPredicted RBP13.54□□□□□ -0.24
LRRC28-206ENST00000558471 EXOC3O60645 756 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 LILRB3O75022 631 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 NR3C1P04150 777 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BMP6P22004 513 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 CA8P35219 290 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BRCC3P46736 316 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 NRIP1P48552 1158 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 MORC3Q14149 939 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BMS1Q14692 1282 aaKnown RBP13.54□□□□□ -0.24
LRRC28-206ENST00000558471 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 KIAA0319Q5VV43 1072 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 SLC9A9Q8IVB4 645 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 GPT2Q8TD30 523 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 IGFLR1Q9H665 355 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 KIAA1468Q9P260 1216 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
LRRC28-206ENST00000558471 IRAK3Q9Y616 596 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 BRWD1Q9NSI6 2320 aa13.54□□□□□ -0.24
LRRC28-206ENST00000558471 I3L4J1 428 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 PIRO00625 290 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 C2CD2LO14523 706 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 PPEF2O14830 753 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 GLUD2P49448 558 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 CASP4P49662 377 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 TFAMQ00059 246 aaKnown RBP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 DSG1Q02413 1049 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 SURF1Q15526 300 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 NFIL3Q16649 462 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 DUSP6Q16828 381 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 SCARA3Q6AZY7 606 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 KIAA1841Q6NSI8 718 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 PPP2R3CQ969Q6 453 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 MFSD14AQ96MC6 490 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 GTPBP4Q9BZE4 634 aaKnown RBP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 MRPL17Q9NRX2 175 aaKnown RBP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
LRRC28-206ENST00000558471 SF3B1O75533 1304 aaKnown RBP eCLIP13.53□□□□□ -0.24
LRRC28-206ENST00000558471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 LINC01565O15544 149 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 TRAPPC3O43617 180 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 URODP06132 367 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CNPP09543 421 aaKnown RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 ADAM15Q13444 863 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 COL19A1Q14993 1142 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 PSMD6Q15008 389 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CTC1Q2NKJ3 1217 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CEP135Q66GS9 1140 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CENPPQ6IPU0 288 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CACTINQ8WUQ7 758 aaKnown RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 RIN2Q8WYP3 895 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 KLHL5Q96PQ7 755 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
LRRC28-206ENST00000558471 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
LRRC28-206ENST00000558471 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms