RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 BEST2Q8NFU1 509 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 HLA-CQ95604 372 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 UBE2ZQ9H832 354 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 CLDND1Q9NY35 253 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 CGNQ9P2M7 1197 aaKnown RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 COG5Q9UP83 839 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 DERAQ9Y315 318 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-205ENST00000558428 IRAK3Q9Y616 596 aa13.41□□□□□ -0.26
SMAD3-205ENST00000558428 SCN1AP35498 2009 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 CYP3A5P20815 502 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 IGFBP6P24592 240 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-205ENST00000558428 LRPAP1P30533 357 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 WNT7BP56706 349 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 DSG1Q02413 1049 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 FAM171A1Q5VUB5 890 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 PABPC5Q96DU9 382 aaKnown RBP13.4□□□□□ -0.26
SMAD3-205ENST00000558428 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-205ENST00000558428 KCTD10Q9H3F6 313 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
SMAD3-205ENST00000558428 FSD2A1L4K1 749 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 PDXKO00764 312 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 LINC01565O15544 149 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 BRCC3P46736 316 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 SNRNP35Q16560 246 aaKnown RBP13.39□□□□□ -0.27
SMAD3-205ENST00000558428 KIAA0319Q5VV43 1072 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 CD300LGQ6UXG3 332 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMAD3-205ENST00000558428 SMYD4Q8IYR2 804 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-205ENST00000558428 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
SMAD3-205ENST00000558428 EFHBQ8N7U6 833 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 RDH13Q8NBN7 331 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 RIN2Q8WYP3 895 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-205ENST00000558428 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 PDE11AQ9HCR9 933 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 CHST7Q9NS84 486 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 A0A0C4DFX4 3053 aa13.39□□□□□ -0.27
SMAD3-205ENST00000558428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 GOLGA6L22H0YM25 854 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 I3L4J1 428 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 CALUO43852 315 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 EXOC3O60645 756 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 LILRB3O75022 631 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 CNPP09543 421 aaKnown RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 KCNA5P22460 613 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 MCM4P33991 863 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 NDUFV1P49821 464 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 TFF2Q03403 129 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 ADAM15Q13444 863 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 SURF1Q15526 300 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 RTP2Q5QGT7 225 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
SMAD3-205ENST00000558428 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
SMAD3-205ENST00000558428 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 PPEF2O14830 753 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 TBX10O75333 385 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 GLP2RO95838 553 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 NR3C1P04150 777 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 TMEM191BP0C7N4 346 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 SRGAP2BP0DMP2 458 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 FGFR3P22607 806 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 KLRC2P26717 231 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 PRCPP42785 496 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
SMAD3-205ENST00000558428 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
SMAD3-205ENST00000558428 CAMK4Q16566 473 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms