RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ING5Q8WYH8 240 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 KIF2CQ99661 725 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
SCFD1-224ENST00000557713 RUSC1Q9BVN2 902 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 C17orf75Q9HAS0 396 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 KMT5AQ9NQR1 393 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
SCFD1-224ENST00000557713 GDE1Q9NZC3 331 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 MRPS23Q9Y3D9 190 aaKnown RBP17.48■□□□□ 0.39
SCFD1-224ENST00000557713 MTF2Q9Y483 593 aaPredicted RBP17.48■□□□□ 0.39
SCFD1-224ENST00000557713 ZNF292O60281 2723 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
SCFD1-224ENST00000557713 WDR27A2RRH5 827 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 LAD1O00515 517 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 PODXLO00592 558 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 ECI2O75521 394 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 RHOP08100 348 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 CDC25AP30304 524 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 RPL9P32969 192 aaKnown RBP17.47■□□□□ 0.39
SCFD1-224ENST00000557713 PFKPQ01813 784 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 DMP1Q13316 513 aaPredicted RBP17.47■□□□□ 0.39
SCFD1-224ENST00000557713 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 MCRS1Q96EZ8 462 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 PLA2G2FQ9BZM2 168 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 CNTN3Q9P232 1028 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 WDR87Q6ZQQ6 2873 aa17.47■□□□□ 0.39
SCFD1-224ENST00000557713 GVINP1Q7Z2Y8 2422 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 FAM170BA6NMN3 283 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 SFI1A8K8P3 1242 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 SYN3O14994 580 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 SEC24AO95486 1093 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 ATF2P15336 505 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 PRPHP41219 470 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.39
SCFD1-224ENST00000557713 MPZL3Q6UWV2 235 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 ERMP1Q7Z2K6 904 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 C18orf25Q96B23 403 aaPredicted RBP17.46■□□□□ 0.39
SCFD1-224ENST00000557713 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
SCFD1-224ENST00000557713 TCHPQ9BT92 498 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 BCO2Q9BYV7 579 aa17.46■□□□□ 0.39
SCFD1-224ENST00000557713 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.46■□□□□ 0.39
SCFD1-224ENST00000557713 H7C4K7 107 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 SLC16A4O15374 487 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 LRG1P02750 347 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 CD72P21854 359 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 ELF1P32519 619 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 UBXN2BQ14CS0 331 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 SLC10A6Q3KNW5 377 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF528Q3MIS6 628 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 PRSS36Q5K4E3 855 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 TANGO2Q6ICL3 276 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 SPIRE2Q8WWL2 714 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 SUSD3Q96L08 255 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 TIPINQ9BVW5 301 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 LTB4R2Q9NPC1 389 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 FBXO4Q9UKT5 387 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 DCHS1Q96JQ0 3298 aa17.45■□□□□ 0.38
SCFD1-224ENST00000557713 PRRG1O14668 218 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 MICAL2O94851 1124 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 CEBPBP17676 345 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 ARPP19P56211 112 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 HYIQ5T013 277 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 SUMF1Q8NBK3 374 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 TMEM161BQ8NDZ6 487 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 CLDN23Q96B33 292 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 ELSPBP1Q96BH3 223 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 PNMA5Q96PV4 448 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 NELL2Q99435 816 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 CYP4F11Q9HBI6 524 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 KCNG1Q9UIX4 513 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 NUB1Q9Y5A7 615 aa17.44■□□□□ 0.38
SCFD1-224ENST00000557713 SHISA7A6NL88 538 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 TOM1L1O75674 476 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 FCARP24071 287 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 MAGEA9P43362 315 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 FZD5Q13467 585 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 SEZ6Q53EL9 994 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 KCTD17Q8N5Z5 321 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 BORCS6Q96GS4 357 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
SCFD1-224ENST00000557713 INSL5Q9Y5Q6 135 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
SCFD1-224ENST00000557713 NRG2O14511 850 aaPredicted RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF197O14709 1029 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 LAMTOR5O43504 91 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 MAPTP10636 758 aaKnown RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 PLS3P13797 630 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 TARSP26639 723 aaKnown RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 CCR2P41597 374 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms