RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FRS3O43559 492 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 MGEA5O60502 916 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 FTH1P19P0C7X4 201 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 MYF5P13349 255 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 BMP7P18075 431 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 SLC6A4P31645 630 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 CREMQ03060 361 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 FAM111BQ6SJ93 734 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 SEM1Q6ZVN7 128 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 UBE3BQ7Z3V4 1068 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 MORC1Q86VD1 984 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 FEZF2Q8TBJ5 459 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 BRIX1Q8TDN6 353 aaKnown RBP5.76□□□□□ -1.49
PRPF39-212ENST00000557477 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 APIPQ96GX9 242 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 ZNF512Q96ME7 567 aaPredicted RBP5.76□□□□□ -1.49
PRPF39-212ENST00000557477 TBCBQ99426 244 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 ELAC2Q9BQ52 826 aaKnown RBP5.76□□□□□ -1.49
PRPF39-212ENST00000557477 FNIP2Q9P278 1114 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 TPCN1Q9ULQ1 816 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 COMMD10Q9Y6G5 202 aa5.76□□□□□ -1.49
PRPF39-212ENST00000557477 MATN4O95460 622 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 LDHAP00338 332 aaKnown RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 CNR2P34972 360 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 PIK3CBP42338 1070 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 TM4SF4P48230 202 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 PIK3CGP48736 1102 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 ALDH5A1P51649 535 aaPredicted RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 RAP2BP61225 183 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 PTH1RQ03431 593 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 CSRP2Q16527 193 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 KHDC1LQ5JSQ8 128 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 FKBP15Q5T1M5 1219 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 ZNF529Q6P280 563 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 FRMD5Q7Z6J6 570 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 C11orf96Q7Z7L8 435 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 TAX1BP1Q86VP1 789 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 TNPO1Q92973 898 aaKnown RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 GJA10Q969M2 543 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 OR14A2Q96R54 314 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 PSMD1Q99460 953 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 NDC1Q9BTX1 674 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 LSM14BQ9BX40 385 aaKnown RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 RSAD1Q9HA92 442 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 SARS2Q9NP81 518 aaKnown RBP5.75□□□□□ -1.49
PRPF39-212ENST00000557477 SLAMF7Q9NQ25 335 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 FBXO34Q9NWN3 711 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 TAGLN3Q9UI15 199 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 CORO2BQ9UQ03 480 aa5.75□□□□□ -1.49
PRPF39-212ENST00000557477 TOPBP1Q92547 1522 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 ARID1BQ8NFD5 2236 aaPredicted RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 B5MCH6 92 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 MYO1FO00160 1098 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 TBX3O15119 743 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 PJA2O43164 708 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SNRPA1P09661 255 aaKnown RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 HDCP19113 662 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SLC7A1P30825 629 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 PHKA1P46020 1223 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 PRIM2P49643 509 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 AK2P54819 239 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SOX8P57073 446 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 CLRN1P58418 232 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 EXOSC9Q06265 439 aaKnown RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 OS9Q13438 667 aaPredicted RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 CCDC93Q567U6 631 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SLFN13Q68D06 897 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 XRRA1Q6P2D8 792 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 LCNL1Q6ZST4 164 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SRLQ86TD4 932 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SPICE1Q8N0Z3 855 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 RNF169Q8NCN4 708 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 IL17RDQ8NFM7 739 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 BORCS6Q96GS4 357 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 P2RX7Q99572 595 aaKnown RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 CPEB1Q9BZB8 566 aaKnown RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 LRRC27Q9C0I9 530 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 NUP62CLQ9H1M0 184 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 NELFAQ9H3P2 528 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 MSL2Q9HCI7 577 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 SIDT1Q9NXL6 827 aaKnown RBP5.74□□□□□ -1.49
PRPF39-212ENST00000557477 DAAM1Q9Y4D1 1078 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 ARAP1Q96P48 1450 aa5.74□□□□□ -1.49
PRPF39-212ENST00000557477 AQRO60306 1485 aaKnown RBP eCLIP5.73□□□□□ -1.499e-6■□□□□ 10.2
PRPF39-212ENST00000557477 PRSS29PA6NIE9 313 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 KPNA5O15131 536 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 MTHFD1P11586 935 aaKnown RBP5.73□□□□□ -1.49
PRPF39-212ENST00000557477 HTR3AP46098 478 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 IFIT5Q13325 482 aaKnown RBP5.73□□□□□ -1.49
PRPF39-212ENST00000557477 GRM7Q14831 915 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 SURF1Q15526 300 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 BMT2Q1RMZ1 405 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 ELOA2Q8IYF1 753 aaPredicted RBP5.73□□□□□ -1.49
PRPF39-212ENST00000557477 PHKBQ93100 1093 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 KCNC2Q96PR1 638 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 PACSIN1Q9BY11 444 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 BTBD1Q9H0C5 482 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms