RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 STK24Q9Y6E0 443 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 CEP295Q9C0D2 2601 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
RDH11-210ENST00000557331 ZNF263O14978 683 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ADAM12O43184 909 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 USO1O60763 962 aaKnown RBP11.23□□□□□ -0.61
RDH11-210ENST00000557331 PFKFB2O60825 505 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 CYP11B2P19099 503 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 HOXA6P31267 233 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 TXKP42681 527 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 STK3Q13188 491 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 PLD1Q13393 1074 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ST3GAL2Q16842 350 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 DGKKQ5KSL6 1271 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
RDH11-210ENST00000557331 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 MFSD6LQ8IWD5 586 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 SYNPOQ8N3V7 929 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 APPL2Q8NEU8 664 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 PIGOQ8TEQ8 1089 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 MTMR9Q96QG7 549 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 CCDC94Q9BW85 323 aaPredicted RBP11.23□□□□□ -0.61
RDH11-210ENST00000557331 LMAN1LQ9HAT1 526 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
RDH11-210ENST00000557331 HCFC1R1Q9NWW0 138 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
RDH11-210ENST00000557331 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
RDH11-210ENST00000557331 DCDC2BA2VCK2 349 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 FGF19O95750 216 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 TDGF1P13385 188 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 RPA1P27694 616 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CLCNKBP51801 687 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
RDH11-210ENST00000557331 ROR1Q01973 937 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 TRIM29Q14134 588 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 SIM2Q14190 667 aaPredicted RBP11.22□□□□□ -0.61
RDH11-210ENST00000557331 FAM78AQ5JUQ0 283 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 PRSS36Q5K4E3 855 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 ATF7IP2Q5U623 682 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 HAUS3Q68CZ6 603 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 LONP2Q86WA8 852 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 NOSTRINQ8IVI9 506 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CSGALNACT1Q8TDX6 532 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 ING5Q8WYH8 240 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 LOXL4Q96JB6 756 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CORO1BQ9BR76 489 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CCDC113Q9H0I3 377 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 CYP4F11Q9HBI6 524 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 ASAH2Q9NR71 780 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
RDH11-210ENST00000557331 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 GDAQ9Y2T3 454 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 USP24Q9UPU5 2620 aa11.22□□□□□ -0.61
RDH11-210ENST00000557331 ATRXP46100 2492 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 WDR27A2RRH5 827 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 K7ERI5 159 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 PAX3P23760 479 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 TKTP29401 623 aaKnown RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 MARCKSP29966 332 aaPredicted RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 GDI1P31150 447 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 GRM5P41594 1212 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 LIMK1P53667 647 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 EPHA5P54756 1037 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SPEM2Q0P670 501 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SCRN1Q12765 414 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 PTPAQ15257 358 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SAFBQ15424 915 aaKnown RBP eCLIP11.21□□□□□ -0.61
RDH11-210ENST00000557331 SLC5A9Q2M3M2 681 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 XKR4Q5GH76 650 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 PPM1JQ5JR12 505 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 ZNF280DQ6N043 979 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 TSSK4Q6SA08 328 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 CATSPER3Q86XQ3 398 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 ST13P5Q8NFI4 369 aaPredicted RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 PLA2G2FQ9BZM2 168 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 SEMA4GQ9NTN9 838 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 ZMYM5Q9UJ78 669 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 TPCN1Q9ULQ1 816 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 NDRG2Q9UN36 371 aaKnown RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
RDH11-210ENST00000557331 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 INSL5Q9Y5Q6 135 aa11.21□□□□□ -0.61
RDH11-210ENST00000557331 RALGAPA1Q6GYQ0 2036 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms