RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 TNNI1P19237 187 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 CYP3A5P20815 502 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 DNAJB2P25686 324 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 OR1G1P47890 313 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
SHMT2-227ENST00000557269 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-227ENST00000557269 SURF1Q15526 300 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 RAB30Q15771 203 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 UPP1Q16831 310 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
SHMT2-227ENST00000557269 KCNT2Q6UVM3 1135 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 LUZP1Q86V48 1076 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 SLC35C1Q96A29 364 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 FAM193BQ96PV7 902 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-227ENST00000557269 TSPAN18Q96SJ8 248 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 CERS4Q9HA82 394 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 MARCH5Q9NX47 278 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
SHMT2-227ENST00000557269 PRG3Q9Y2Y8 225 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-227ENST00000557269 ANO9A1A5B4 782 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 KCNJ18B7U540 433 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 IKBKBO14920 756 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 KIF4AO95239 1232 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 GNA14O95837 355 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 ZNF18P17022 549 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 LRPAP1P30533 357 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 BMPR1AP36894 532 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 GCLMP48507 274 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 KCNJ12Q14500 433 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 TDRD10Q5VZ19 366 aaKnown RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 C9orf57Q5W0N0 161 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 C15orf39Q6ZRI6 1047 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 NT5DC4Q86YG4 428 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 SLC39A11Q8N1S5 342 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 HASPINQ8TF76 798 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 TIFAQ96CG3 184 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 LRCH3Q96II8 777 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
SHMT2-227ENST00000557269 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
SHMT2-227ENST00000557269 EPOPA6NHQ4 379 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 PODXLO00592 558 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 PIRO00625 290 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 SPTLC1O15269 473 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 LRRN2O75325 713 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 VNN1O95497 513 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ALDH2P05091 517 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ITGB3P05106 788 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 TMEM191BP0C7N4 346 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ATP1A3P13637 1013 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 LAG3P18627 525 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ALDH7A1P49419 539 aaKnown RBP13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ERVK-21P61565 698 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ENPEPQ07075 957 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 CBWD6Q4V339 395 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 EPC2Q52LR7 807 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 TCP11X2Q5H9J9 407 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 CBWD3Q5JTY5 395 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 CBWD5Q5RIA9 395 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 TCERG1LQ5VWI1 586 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 PPP2R2DQ66LE6 453 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 CACTINQ8WUQ7 758 aaKnown RBP13.85□□□□□ -0.19
SHMT2-227ENST00000557269 ZNF558Q96NG5 402 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
SHMT2-227ENST00000557269 B3GAT3O94766 335 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 TNNC2P02585 160 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
SHMT2-227ENST00000557269 CTNNB1P35222 781 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 ZACNQ401N2 412 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 MIIPQ5JXC2 388 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 KLHL23Q8NBE8 558 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 FAM200AQ8TCP9 573 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
SHMT2-227ENST00000557269 IGSF21Q96ID5 467 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 UROC1Q96N76 676 aa13.84□□□□□ -0.19
SHMT2-227ENST00000557269 TGS1Q96RS0 853 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms