RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 CUL2Q13617 745 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 KRT71Q3SY84 523 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 MMS22LQ6ZRQ5 1243 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 CEP120Q8N960 986 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
FOXN3-214ENST00000557258 NLRP4Q96MN2 994 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 RPS6KC1Q96S38 1066 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 TMBIM4Q9HC24 238 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 ZDHHC18Q9NUE0 388 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 RRP15Q9Y3B9 282 aaKnown RBP20.6■□□□□ 0.89
FOXN3-214ENST00000557258 A0A0B4J269 797 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 THAP12O43422 761 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 IVLP07476 585 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 IGBP1P78318 339 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 IFFO1Q0D2I5 559 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 SH3D19Q5HYK7 790 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 ZDHHC24Q6UX98 284 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 RHPN2Q8IUC4 686 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 WNT8AQ9H1J5 351 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 FAM114A2Q9NRY5 505 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 NOVA2Q9UNW9 492 aaKnown RBP20.6■□□□□ 0.89
FOXN3-214ENST00000557258 PCDHA3Q9Y5H8 950 aa20.6■□□□□ 0.89
FOXN3-214ENST00000557258 TLDC2A0PJX2 215 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 ACO1P21399 889 aaKnown RBP20.59■□□□□ 0.89
FOXN3-214ENST00000557258 RWDD2BP57060 319 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 RIOX2Q8IUF8 465 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 CCDC50Q8IVM0 306 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 THNSL1Q8IYQ7 743 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 SEC14L1Q92503 715 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 PDGFCQ9NRA1 345 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 CHST7Q9NS84 486 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 DIS3Q9Y2L1 958 aaKnown RBP20.59■□□□□ 0.89
FOXN3-214ENST00000557258 PCDHB2Q9Y5E7 798 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 NOP56O00567 594 aaKnown RBP20.59■□□□□ 0.89
FOXN3-214ENST00000557258 B4GALT5O43286 388 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 ICAM3P32942 547 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 NCOA4Q13772 614 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 CHADLQ6NUI6 762 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 PRUNE1Q86TP1 453 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 RBBP8NLQ8NC74 664 aaPredicted RBP20.59■□□□□ 0.89
FOXN3-214ENST00000557258 AZI2Q9H6S1 392 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
FOXN3-214ENST00000557258 PPFIA4O75335 1185 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 SLCO1A2P46721 670 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 SF3A3Q12874 501 aaKnown RBP eCLIP20.58■□□□□ 0.89
FOXN3-214ENST00000557258 ORC1Q13415 861 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 ACSF2Q96CM8 615 aaPredicted RBP20.58■□□□□ 0.89
FOXN3-214ENST00000557258 GRHL1Q9NZI5 618 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 UVRAGQ9P2Y5 699 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 CNTNAP2Q9UHC6 1331 aa20.58■□□□□ 0.89
FOXN3-214ENST00000557258 WEE2P0C1S8 567 aa20.58■□□□□ 0.88
FOXN3-214ENST00000557258 TCF4P15884 667 aa20.58■□□□□ 0.88
FOXN3-214ENST00000557258 CTNNA2P26232 953 aa20.58■□□□□ 0.88
FOXN3-214ENST00000557258 SIX1Q15475 284 aaPredicted RBP20.58■□□□□ 0.88
FOXN3-214ENST00000557258 TMEM132AQ24JP5 1023 aa20.58■□□□□ 0.88
FOXN3-214ENST00000557258 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.88
FOXN3-214ENST00000557258 PPANQ9NQ55 473 aaKnown RBP20.58■□□□□ 0.88
FOXN3-214ENST00000557258 ADCY3O60266 1144 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 RPS6KA5O75582 802 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 MTA2O94776 668 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 MYL6P60660 151 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 TFAMQ00059 246 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 SRLQ86TD4 932 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 NRBP2Q9NSY0 501 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 R3HDM2Q9Y2K5 976 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 IGKV6D-21A0A0A0MT36 114 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 CNMDO75829 334 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 CHRNA3P32297 505 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 COILP38432 576 aaPredicted RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 CLCN3P51790 818 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 MAGOHP61326 146 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 LAMTOR4Q0VGL1 99 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 MKRN3Q13064 507 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 PPP1R7Q15435 360 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 TARBP2Q15633 366 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 ATP13A4Q4VNC1 1196 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 ZFYVE27Q5T4F4 411 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 CD302Q8IX05 232 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 SEPT1Q8WYJ6 367 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 PWWP2AQ96N64 755 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 NIFKQ9BYG3 293 aaKnown RBP20.57■□□□□ 0.88
FOXN3-214ENST00000557258 ADAM22Q9P0K1 906 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
FOXN3-214ENST00000557258 H0YCG3 227 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 LSP1P33241 339 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 RPL7AP62424 266 aaKnown RBP20.56■□□□□ 0.88
FOXN3-214ENST00000557258 CLDN10P78369 228 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 SGO2Q562F6 1265 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 ANKS1BQ7Z6G8 1248 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 TMEM192Q8IY95 271 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 SPATA33Q96N06 139 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 EPB41L4BQ9H329 900 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 MCM3APO60318 1980 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 PI4K2BG5E9Z4 385 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 MYO1CO00159 1063 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 NDUFAB1O14561 156 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 CLTAP09496 248 aa20.56■□□□□ 0.88
FOXN3-214ENST00000557258 BRD2P25440 801 aaKnown RBP20.56■□□□□ 0.88
FOXN3-214ENST00000557258 TAS2R40P59535 323 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms