RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
APEX1-217ENST00000557181 PSMD6Q15008 389 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 NFIL3Q16649 462 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
APEX1-217ENST00000557181 CENPPQ6IPU0 288 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
APEX1-217ENST00000557181 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
APEX1-217ENST00000557181 FAM186BQ8IYM0 893 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 FBXL18Q96ME1 805 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 TCF25Q9BQ70 676 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 DPP3Q9NY33 737 aa13.78□□□□□ -0.2
APEX1-217ENST00000557181 TRIM49BA6NDI0 452 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 PHACTR2O75167 634 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 KIF4AO95239 1232 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 ADRB2P07550 413 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 KRT19P08727 400 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 ANK1P16157 1881 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 STX17P56962 302 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 NLRP12P59046 1061 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 SMC1AQ14683 1233 aaKnown RBP13.77□□□□□ -0.21
APEX1-217ENST00000557181 UPP1Q16831 310 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 DUOXA2Q1HG44 320 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 PLPP4Q5VZY2 271 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 INTS8Q75QN2 995 aaKnown RBP13.77□□□□□ -0.21
APEX1-217ENST00000557181 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
APEX1-217ENST00000557181 CEP57Q86XR8 500 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 WDR49Q8IV35 697 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 VPS52Q8N1B4 723 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 GUCD1Q96NT3 240 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 MARCH5Q9NX47 278 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 CACNG4Q9UBN1 327 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
APEX1-217ENST00000557181 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 LRPAP1P30533 357 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 PNPLA4P41247 253 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 GUCY2FP51841 1108 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 AP3M2P53677 418 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 BIRC3Q13489 604 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 SKIV2LQ15477 1246 aaKnown RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 NAB2Q15742 525 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 ZCWPW2Q504Y3 356 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 LMBRD2Q68DH5 695 aaPredicted RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 DSTYKQ6XUX3 929 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 TMEM174Q8WUU8 243 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 MTMR12Q9C0I1 747 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
APEX1-217ENST00000557181 ANO10Q9NW15 660 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 DMAC2Q9NW81 257 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 ITGA11Q9UKX5 1188 aa13.76□□□□□ -0.21
APEX1-217ENST00000557181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
APEX1-217ENST00000557181 TMEM189-UBE2V1I3L0A0 370 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 C2CD2LO14523 706 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 MAPK13O15264 365 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
APEX1-217ENST00000557181 STX10O60499 249 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
APEX1-217ENST00000557181 SOD2P04179 222 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 BMP6P22004 513 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 PAX3P23760 479 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 GLUD2P49448 558 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 CASP4P49662 377 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 VAMP7P51809 220 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 RBP5P82980 135 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 CREMQ03060 361 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 TRPC3Q13507 836 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 ZBTB6Q15916 424 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 STX1AQ16623 288 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 SV2CQ496J9 727 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 CREBRFQ8IUR6 639 aa13.75□□□□□ -0.21
APEX1-217ENST00000557181 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
APEX1-217ENST00000557181 PPM1EQ8WY54 764 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms