RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OSBPL6Q9BZF3 934 aa20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 TMEM134Q9H6X4 195 aa20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 LTB4R2Q9NPC1 389 aa20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 AVENQ9NQS1 362 aaPredicted RBP20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 SPATA6Q9NWH7 488 aaPredicted RBP20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 GDE1Q9NZC3 331 aa20.06■□□□□ 0.8
VIPAS39-209ENST00000556909 E9PMD0 336 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 ABLIM1O14639 778 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 ECI2O75521 394 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 ABLIM3O94929 683 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 CEBPBP17676 345 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 CD72P21854 359 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 PROZP22891 400 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 PTGDRQ13258 359 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 POTEHQ6S545 545 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 KIAA2013Q8IYS2 634 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 MCRS1Q96EZ8 462 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 RUSC1Q9BVN2 902 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 TARS2Q9BW92 718 aaKnown RBP20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 RAB34Q9BZG1 259 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 PLA2G2FQ9BZM2 168 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 STK24Q9Y6E0 443 aa20.05■□□□□ 0.8
VIPAS39-209ENST00000556909 FAM170BA6NMN3 283 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 PP2D1A8MPX8 630 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 PRRG1O14668 218 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 SYN3O14994 580 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 MEFVO15553 781 aaPredicted RBP20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 TBC1D4O60343 1298 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 LRG1P02750 347 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 MCF2P10911 925 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 KCNE1P15382 129 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 TOB1P50616 345 aaPredicted RBP20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 MAPK7Q13164 816 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 ZNF528Q3MIS6 628 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 MPZL3Q6UWV2 235 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 TPRG1Q6ZUI0 275 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 FAM184AQ8NB25 1140 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 C18orf25Q96B23 403 aaPredicted RBP20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 RMDN1Q96DB5 314 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 DRC1Q96MC2 740 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 HINFPQ9BQA5 517 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 KMT5AQ9NQR1 393 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 CNTN3Q9P232 1028 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 FBXO4Q9UKT5 387 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 DNM3Q9UQ16 869 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
VIPAS39-209ENST00000556909 F5P12259 2224 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 LAMTOR5O43504 91 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 PTPN2P17706 415 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 U2AF2P26368 475 aaKnown RBP eCLIP20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 TARSP26639 723 aaKnown RBP20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 ELF1P32519 619 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 MAGEA9P43362 315 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 ARPP19P56211 112 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 PRSS36Q5K4E3 855 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 KRT79Q5XKE5 535 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 RINT1Q6NUQ1 792 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 SUMF1Q8NBK3 374 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 RUBCNQ92622 972 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 ELSPBP1Q96BH3 223 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 ACAP3Q96P50 834 aa20.03■□□□□ 0.8
VIPAS39-209ENST00000556909 KINO60870 393 aaKnown RBP20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 SEC24AO95486 1093 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 HARSP12081 509 aaKnown RBP20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 ATF2P15336 505 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 FCARP24071 287 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 RPL9P32969 192 aaKnown RBP20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 MRPL58Q14197 206 aaKnown RBP20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 IL17AQ16552 155 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 ZBTB41Q5SVQ8 909 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 TANGO2Q6ICL3 276 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 C1orf186Q6ZWK4 172 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 KCNK18Q7Z418 384 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 TCEAL8Q8IYN2 117 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 TCEAL4Q96EI5 215 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 CORO1BQ9BR76 489 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 TCHPQ9BT92 498 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 C17orf75Q9HAS0 396 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 CYP4F11Q9HBI6 524 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 FBXL5Q9UKA1 691 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 NUB1Q9Y5A7 615 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 INSL5Q9Y5Q6 135 aa20.02■□□□□ 0.8
VIPAS39-209ENST00000556909 H7C4K7 107 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 LAD1O00515 517 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 SLC16A4O15374 487 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 CDC25AP30304 524 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 DCLK2Q8N568 766 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 CLDN23Q96B33 292 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 ZBTB45Q96K62 511 aaPredicted RBP20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 SUSD3Q96L08 255 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 ZSCAN31Q96LW9 406 aaPredicted RBP20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 MMTAG2Q9BU76 263 aaKnown RBP20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 SH2B1Q9NRF2 756 aaPredicted RBP20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 HEBP1Q9NRV9 189 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 ANKFY1Q9P2R3 1169 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 ANK1P16157 1881 aa20.01■□□□□ 0.79
VIPAS39-209ENST00000556909 SHISA7A6NL88 538 aa20■□□□□ 0.79
VIPAS39-209ENST00000556909 NRG2O14511 850 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms