RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 CCDC127Q96BQ5 260 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 EEF2KMTQ96G04 330 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 ZFP42Q96MM3 310 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 RAD9AQ99638 391 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
FOXN3-212ENST00000556541 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 CXXC1Q9P0U4 656 aaPredicted RBP12.17□□□□□ -0.46
FOXN3-212ENST00000556541 STK39Q9UEW8 545 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 INSL6Q9Y581 213 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 SCN1AP35498 2009 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 PIRO00625 290 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 FAM163BP0C2L3 166 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 DLATP10515 647 aaKnown RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 FGFR1P11362 822 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 ATP2A2P16615 1042 aaKnown RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 AARSP49588 968 aaKnown RBP eCLIP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 SCNN1GP51170 649 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 RBP5P82980 135 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 TDRD10Q5VZ19 366 aaKnown RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 C1orf127Q8N9H9 656 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 RNF214Q8ND24 703 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 FBXL13Q8NEE6 735 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 ZNF560Q96MR9 790 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
FOXN3-212ENST00000556541 MIOSQ9NXC5 875 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 DPP3Q9NY33 737 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 RWDD3Q9Y3V2 267 aa12.16□□□□□ -0.46
FOXN3-212ENST00000556541 ZBBXA8MT70 800 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 TRIM49P0CI25 452 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 TRIM49CP0CI26 452 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 RFX1P22670 979 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 TFAMQ00059 246 aaKnown RBP12.15□□□□□ -0.46
FOXN3-212ENST00000556541 MYL7Q01449 175 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 NR1I3Q14994 352 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 SHHQ15465 462 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 CBWD6Q4V339 395 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 CBWD3Q5JTY5 395 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 CBWD5Q5RIA9 395 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 C9orf57Q5W0N0 161 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 OR5B17Q8NGF7 314 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 RNPC3Q96LT9 517 aaKnown RBP12.15□□□□□ -0.46
FOXN3-212ENST00000556541 MTMR12Q9C0I1 747 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 PLCB1Q9NQ66 1216 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 SIX4Q9UIU6 781 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 PCDHA11Q9Y5I1 949 aa12.15□□□□□ -0.46
FOXN3-212ENST00000556541 ITIH6Q6UXX5 1313 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 ARHGEF37A1IGU5 675 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 GOLGA6L3A6NEY3 463 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 VNN1O95497 513 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
FOXN3-212ENST00000556541 SERPINC1P01008 464 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 LAG3P18627 525 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 PBX1P40424 430 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 GCLMP48507 274 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 UBASH3AP57075 661 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 SOX4Q06945 474 aaPredicted RBP12.14□□□□□ -0.47
FOXN3-212ENST00000556541 NCOA4Q13772 614 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 UPP1Q16831 310 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 FIGNQ5HY92 759 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 C9orf50Q5SZB4 431 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 DCLRE1AQ6PJP8 1040 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 GPR65Q8IYL9 337 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 TDHQ8IZJ6 230 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 MRFAP1L1Q96HT8 127 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 SAMD11Q96NU1 681 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 FAM193BQ96PV7 902 aaPredicted RBP12.14□□□□□ -0.47
FOXN3-212ENST00000556541 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 POP1Q99575 1024 aaKnown RBP12.14□□□□□ -0.47
FOXN3-212ENST00000556541 XYLT2Q9H1B5 865 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 CXCL16Q9H2A7 254 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 CWH43Q9H720 699 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 NRDE2Q9H7Z3 1164 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 GDAP2Q9NXN4 497 aa12.14□□□□□ -0.47
FOXN3-212ENST00000556541 TSC2P49815 1807 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms