RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
SRP54-208ENST00000555557 ITGB8P26012 769 aa11□□□□□ -0.65
SRP54-208ENST00000555557 AP3M2P53677 418 aa11□□□□□ -0.65
SRP54-208ENST00000555557 MYL6P60660 151 aa11□□□□□ -0.65
SRP54-208ENST00000555557 ARID5AQ03989 594 aa11□□□□□ -0.65
SRP54-208ENST00000555557 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
SRP54-208ENST00000555557 PDXDC1Q6P996 788 aa11□□□□□ -0.65
SRP54-208ENST00000555557 WDR59Q6PJI9 974 aa11□□□□□ -0.65
SRP54-208ENST00000555557 AGMOQ6ZNB7 445 aa11□□□□□ -0.65
SRP54-208ENST00000555557 TMEM139Q8IV31 216 aa11□□□□□ -0.65
SRP54-208ENST00000555557 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
SRP54-208ENST00000555557 HELQQ8TDG4 1101 aa11□□□□□ -0.65
SRP54-208ENST00000555557 PANX2Q96RD6 677 aa11□□□□□ -0.65
SRP54-208ENST00000555557 GAD1Q99259 594 aa11□□□□□ -0.65
SRP54-208ENST00000555557 DNAJC7Q99615 494 aa11□□□□□ -0.65
SRP54-208ENST00000555557 CHP1Q99653 195 aa11□□□□□ -0.65
SRP54-208ENST00000555557 BAG1Q99933 345 aaPredicted RBP11□□□□□ -0.65
SRP54-208ENST00000555557 PRDM5Q9NQX1 630 aaPredicted RBP11□□□□□ -0.65
SRP54-208ENST00000555557 MIOSQ9NXC5 875 aa11□□□□□ -0.65
SRP54-208ENST00000555557 CNTN3Q9P232 1028 aa11□□□□□ -0.65
SRP54-208ENST00000555557 TUBGCP4Q9UGJ1 667 aa11□□□□□ -0.65
SRP54-208ENST00000555557 SIX4Q9UIU6 781 aa11□□□□□ -0.65
SRP54-208ENST00000555557 PLAGL2Q9UPG8 496 aa11□□□□□ -0.65
SRP54-208ENST00000555557 C2CD2Q9Y426 696 aa11□□□□□ -0.65
SRP54-208ENST00000555557 TRIM43BA6NCK2 446 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 MLH1P40692 756 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 TRPC3Q13507 836 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 DRAP1Q14919 205 aaPredicted RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 MRPL10Q7Z7H8 261 aaKnown RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 CD302Q8IX05 232 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 CXorf38Q8TB03 319 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 TRIM43Q96BQ3 446 aaPredicted RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 IQCDQ96DY2 449 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 NT5C1BQ96P26 610 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 SPAG5Q96R06 1193 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 ARID3AQ99856 593 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 TRAIPQ9BWF2 469 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 EDEM3Q9BZQ6 932 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 RRAGDQ9NQL2 400 aaPredicted RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 RGS18Q9NS28 235 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 DPP3Q9NY33 737 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 NUB1Q9Y5A7 615 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 SOWAHDA6NJG2 315 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 C9IYK1 514 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 PTGESO14684 152 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 ZNF623O75123 536 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 POLR2BP30876 1174 aaKnown RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 ZBTB6Q15916 424 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 TSR1Q2NL82 804 aaKnown RBP10.99□□□□□ -0.65
SRP54-208ENST00000555557 XKR4Q5GH76 650 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 WDR44Q5JSH3 913 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 UBE2Q1Q7Z7E8 422 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 ECHDC2Q86YB7 292 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 KREMEN1Q96MU8 473 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 GOLGA2P5Q9HBQ8 144 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 AGAP1Q9UPQ3 857 aa10.99□□□□□ -0.65
SRP54-208ENST00000555557 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 ARL5CA6NH57 179 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 ENPP3O14638 875 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 PPEF2O14830 753 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 PLEKP08567 350 aaPredicted RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 RAB27AP51159 221 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 JAM2P57087 298 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 NOP14P78316 857 aaKnown RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 SOX4Q06945 474 aaPredicted RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 MTF1Q14872 753 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 SFMBT2Q5VUG0 894 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 SEPT8Q92599 483 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 XYLT2Q9H1B5 865 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
SRP54-208ENST00000555557 C1orf112Q9NSG2 853 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 TET1Q8NFU7 2136 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 ANK1P16157 1881 aa10.98□□□□□ -0.65
SRP54-208ENST00000555557 F8VZ95 297 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 GFPT2O94808 682 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 ASS1P00966 412 aaKnown RBP10.97□□□□□ -0.65
SRP54-208ENST00000555557 KCNE1P15382 129 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 USP8P40818 1118 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 SCNN1GP51170 649 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 SGSM1Q2NKQ1 1148 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 ZNF699Q32M78 642 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 C17orf53Q8N3J3 647 aaPredicted RBP10.97□□□□□ -0.65
SRP54-208ENST00000555557 BEST2Q8NFU1 509 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 VWCEQ96DN2 955 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 FTHL17Q9BXU8 183 aa10.97□□□□□ -0.65
SRP54-208ENST00000555557 RSAD1Q9HA92 442 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms