RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 MUM1Q2TAK8 710 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 AKNAD1Q5T1N1 836 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 RNF219Q5W0B1 726 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-216ENST00000555550 ZNF788Q6ZQV5 615 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 TSPEARQ8WU66 669 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 FATE1Q969F0 183 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 FUBP1Q96AE4 644 aaKnown RBP5.22□□□□□ -1.57
SCFD1-216ENST00000555550 BOD1Q96IK1 185 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 C1QTNF7Q9BXJ2 289 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 TMX1Q9H3N1 280 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 GALNT9Q9HCQ5 603 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 TMEM74BQ9NUR3 256 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 DNAJC28Q9NX36 388 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 MCM8Q9UJA3 840 aa5.22□□□□□ -1.57
SCFD1-216ENST00000555550 PROP1O75360 226 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 FGFR4P22455 802 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 ECHS1P30084 290 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 MUM1L1Q5H9M0 696 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 AMOTL1Q8IY63 956 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-216ENST00000555550 GPR156Q8NFN8 814 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 STON2Q8WXE9 905 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 FUBP3Q96I24 572 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCFD1-216ENST00000555550 ADI1Q9BV57 179 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 SPC25Q9HBM1 224 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 ARPP21Q9UBL0 812 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-216ENST00000555550 USP25Q9UHP3 1055 aa5.21□□□□□ -1.58
SCFD1-216ENST00000555550 GPANK1O95872 356 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 SNRPA1P09661 255 aaKnown RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 OSMP13725 252 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 SLC6A2P23975 617 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 SLC5A3P53794 718 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 NOMO1Q15155 1222 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 ADRM1Q16186 407 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 CYP2A13Q16696 494 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 MST1LQ2TV78 715 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 GJC2Q5T442 439 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 RNF187Q5TA31 235 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 FAM43AQ8N2R8 423 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 FAM126AQ9BYI3 521 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 REXO4Q9GZR2 422 aaKnown RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 GREM2Q9H772 168 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 UNKLQ9H9P5 680 aaKnown RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 KMT5AQ9NQR1 393 aa5.2□□□□□ -1.58
SCFD1-216ENST00000555550 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-216ENST00000555550 ATRNL1Q5VV63 1379 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 GPR3P46089 330 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 CLUL1Q15846 466 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 RRP12Q5JTH9 1297 aaKnown RBP5.19□□□□□ -1.58
SCFD1-216ENST00000555550 ZNF425Q6IV72 752 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 ZNF572Q7Z3I7 529 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-216ENST00000555550 KCNK18Q7Z418 384 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 TRMT2AQ8IZ69 625 aaKnown RBP5.19□□□□□ -1.58
SCFD1-216ENST00000555550 OR7D4Q8NG98 312 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 ORAI2Q96SN7 254 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 MRI1Q9BV20 369 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 RNPEPQ9H4A4 650 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 DMRT3Q9NQL9 472 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 RBM12Q9NTZ6 932 aaKnown RBP5.19□□□□□ -1.58
SCFD1-216ENST00000555550 DNM3Q9UQ16 869 aa5.19□□□□□ -1.58
SCFD1-216ENST00000555550 MTO1Q9Y2Z2 717 aaKnown RBP5.19□□□□□ -1.58
SCFD1-216ENST00000555550 IKBKBO14920 756 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 RAP2AP10114 183 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 ALOX15P16050 662 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-216ENST00000555550 UBXN2BQ14CS0 331 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 ANO4Q32M45 955 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 AFMIDQ63HM1 303 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 Q6ZVL8 140 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 PQLC1Q8N2U9 271 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 HEPHQ9BQS7 1158 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 SENP6Q9GZR1 1112 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-216ENST00000555550 BCO1Q9HAY6 547 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 CPNE5Q9HCH3 593 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 KCTD5Q9NXV2 234 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 SLC5A4Q9NY91 659 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 DMTF1Q9Y222 760 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 SIK3Q9Y2K2 1263 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 PCDHGA2Q9Y5H1 932 aa5.18□□□□□ -1.58
SCFD1-216ENST00000555550 WIPF3A6NGB9 483 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 GSPT1P15170 499 aaKnown RBP5.17□□□□□ -1.58
SCFD1-216ENST00000555550 MALLQ13021 153 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 FOXR2Q6PJQ5 311 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 DDX42Q86XP3 938 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCFD1-216ENST00000555550 CNTD1Q8N815 330 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 DPF1Q92782 380 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 LANCL2Q9NS86 450 aa5.17□□□□□ -1.58
SCFD1-216ENST00000555550 ZNF70Q9UC06 446 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-216ENST00000555550 MANSC4A6NHS7 340 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-216ENST00000555550 ENDOD1O94919 500 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 ZFPL1O95159 310 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 POMCP01189 267 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 IL2RBP14784 551 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 GCSHP23434 173 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 SREBF1P36956 1147 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 VAV2P52735 878 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 ERVK-21P61565 698 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 EXOSC10Q01780 885 aaKnown RBP5.16□□□□□ -1.58
SCFD1-216ENST00000555550 MAPK7Q13164 816 aa5.16□□□□□ -1.58
SCFD1-216ENST00000555550 KLF1Q13351 362 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-216ENST00000555550 PGM2L1Q6PCE3 622 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms