RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NKD2Q969F2 451 aaPredicted RBP6.77□□□□□ -1.33
VRK1-205ENST00000555402 C7orf25Q9BPX7 421 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 SOX7Q9BT81 388 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 CYP4F11Q9HBI6 524 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.33
VRK1-205ENST00000555402 IPPQ9Y573 584 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 DAPK3O43293 454 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 TPD52L2O43399 206 aaKnown RBP6.76□□□□□ -1.33
VRK1-205ENST00000555402 PRAMEF4O60810 478 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 CDK4P11802 303 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 EDNRBP24530 442 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 CD69Q07108 199 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 PICALMQ13492 652 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 IL10RAQ13651 578 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 SAFBQ15424 915 aaKnown RBP eCLIP6.76□□□□□ -1.33
VRK1-205ENST00000555402 CCDC157Q569K6 752 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 BHLHA9Q7RTU4 235 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 DENND1CQ8IV53 801 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 PJA1Q8NG27 643 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 PPP1R35Q8TAP8 253 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 CPT1CQ8TCG5 803 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 HAPLN2Q9GZV7 340 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 USP25Q9UHP3 1055 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 PCDHA13Q9Y5I0 950 aa6.76□□□□□ -1.33
VRK1-205ENST00000555402 FAM171A2A8MVW0 826 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 LY86O95711 162 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 RPLP2P05387 115 aaKnown RBP6.75□□□□□ -1.33
VRK1-205ENST00000555402 HNRNPLP14866 589 aaKnown RBP eCLIP6.75□□□□□ -1.33
VRK1-205ENST00000555402 ZFP36P26651 326 aaKnown RBP6.75□□□□□ -1.33
VRK1-205ENST00000555402 ADSLP30566 484 aaPredicted RBP6.75□□□□□ -1.33
VRK1-205ENST00000555402 WASP42768 502 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 PAPD7Q5XG87 772 aaKnown RBP6.75□□□□□ -1.33
VRK1-205ENST00000555402 KRT40Q6A162 431 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 IL31Q6EBC2 164 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 PPP4R3AQ6IN85 833 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 CCDC149Q6ZUS6 474 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 SRGAP1Q7Z6B7 1085 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 CLEC14AQ86T13 490 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 RHOT1Q8IXI2 618 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 GPR156Q8NFN8 814 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 KAT5Q92993 513 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 ARL8AQ96BM9 186 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 UIMC1Q96RL1 719 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 OSBPL6Q9BZF3 934 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 CHST12Q9NRB3 414 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 RPTORQ8N122 1335 aa6.75□□□□□ -1.33
VRK1-205ENST00000555402 H3BML4 177 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 TOX4O94842 621 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 CTSSP25774 331 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 USP14P54578 494 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 PPP3CAQ08209 521 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 MGAT2Q10469 447 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 CHST15Q7LFX5 561 aaPredicted RBP6.74□□□□□ -1.33
VRK1-205ENST00000555402 RD3Q7Z3Z2 195 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 ST8SIA2Q92186 375 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 KMT5AQ9NQR1 393 aa6.74□□□□□ -1.33
VRK1-205ENST00000555402 APAF1O14727 1248 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 TPP1O14773 563 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 PHF2O75151 1096 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 TMEM127O75204 238 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 RECQL4O94761 1208 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 UBXN7O94888 489 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 ALDH2P05091 517 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 JUNP05412 331 aaKnown RBP6.73□□□□□ -1.33
VRK1-205ENST00000555402 IFIT2P09913 472 aaKnown RBP6.73□□□□□ -1.33
VRK1-205ENST00000555402 PHKG2P15735 406 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 NEK3P51956 506 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 PER3P56645 1201 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 MEF2AQ02078 507 aaPredicted RBP6.73□□□□□ -1.33
VRK1-205ENST00000555402 GALEQ14376 348 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 ABHD15Q6UXT9 468 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 OVCH2Q7RTZ1 564 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 OR2I1PQ8NGU4 316 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 SVIPQ8NHG7 77 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 PPP1R14CQ8TAE6 165 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 MORC4Q8TE76 937 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 CGRRF1Q99675 332 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 R3HDMLQ9H3Y0 253 aa6.73□□□□□ -1.33
VRK1-205ENST00000555402 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
VRK1-205ENST00000555402 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 A0A1W2PR48 441 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 A6NNZ2 444 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 FAM227AF5H4B4 570 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 TUSC2O75896 110 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 SCAF4O95104 1147 aaKnown RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 FTLP02792 175 aaPredicted RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 LTA4HP09960 611 aaKnown RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 GAAP10253 952 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 ITGB6P18564 788 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 RHCEP18577 417 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 LAG3P18627 525 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 HTR1BP28222 390 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 ECHS1P30084 290 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 RHDQ02161 417 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 KIAA0753Q2KHM9 967 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 DCAF17Q5H9S7 520 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms