RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CWH43Q9H720 699 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 L2HGDHQ9H9P8 463 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 AGPAT3Q9NRZ7 376 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 SAMSN1Q9NSI8 373 aaKnown RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 PRG3Q9Y2Y8 225 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-213ENST00000555386 PLXNA4Q9HCM2 1894 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 UBE4BO95155 1302 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
PSEN1-213ENST00000555386 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 LACTBL1A8MY62 500 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 TGFB1I1O43294 461 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 B4GALT3O60512 393 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 DDHD2O94830 711 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 IGFBP4P22692 258 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 CA8P35219 290 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PRCPP42785 496 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 BCAR1P56945 870 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ETF1P62495 437 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SLC10A6Q3KNW5 377 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 APTXQ7Z2E3 356 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 MICALL1Q8N3F8 863 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 TC2NQ8N9U0 490 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 COLGALT1Q8NBJ5 622 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 FAM84AQ96KN4 292 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 MRPL9Q9BYD2 267 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 GOLGA2P5Q9HBQ8 144 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ALG13Q9NP73 1137 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 TOPORSQ9NS56 1045 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 HSPBP1Q9NZL4 362 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 LIMA1Q9UHB6 759 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PCDHB12Q9Y5F1 795 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 COL4A4P53420 1690 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SMIM28A0A1B0GU29 152 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 AKR1B15C9JRZ8 316 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 F8W810 466 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PTGESO14684 152 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 MEFVO15553 781 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KIF20AO95235 890 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SLU7O95391 586 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 THP07101 528 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 GARTP22102 1010 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 BMPR1AP36894 532 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PBX1P40424 430 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PPP1R2P41236 205 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SLC11A1P49279 550 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ALDH7A1P49419 539 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PSEN1P49768 467 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 GUCY2FP51841 1108 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ERVK-21P61565 698 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 PAK1Q13153 545 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 GPM6BQ13491 265 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KLHL23Q8NBE8 558 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 GSTCDQ8NEC7 633 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 MYLIPQ8WY64 445 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KCNN1Q92952 543 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 C18orf25Q96B23 403 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SNX27Q96L92 541 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 SRRTQ9BXP5 876 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 RBAKQ9NYW8 714 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 CGNQ9P2M7 1197 aaKnown RBP10.68□□□□□ -0.7
PSEN1-213ENST00000555386 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
PSEN1-213ENST00000555386 COL6A3P12111 3177 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 CALUO43852 315 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 EXTL3O43909 919 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 FAM189A1O60320 539 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 EXOC3O60645 756 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 ALDH2P05091 517 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 TPM1P09493 284 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 LAG3P18627 525 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 STX17P56962 302 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 GRIK3Q13003 919 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 STIM1Q13586 685 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 TRIM14Q14142 442 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 BMT2Q1RMZ1 405 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 LMBRD2Q68DH5 695 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 JADE1Q6IE81 842 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 CRELD2Q6UXH1 353 aaPredicted RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 PPFIBP1Q86W92 1011 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 REXO1L1PQ8IX06 675 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 GPD1LQ8N335 351 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 GUF1Q8N442 669 aaKnown RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 PDCL2Q8N4E4 241 aa10.67□□□□□ -0.7
PSEN1-213ENST00000555386 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
PSEN1-213ENST00000555386 PAAF1Q9BRP4 392 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms