RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, human

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSKIP-204	ENST00000555088	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TBKBP1	A7MCY6	615 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	P4HA2	O15460	535 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	N4BP1	O75113	896 aa	Known RBP	13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TNNC2	P02585	160 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TPM2	P07951	284 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	DLAT	P10515	647 aa	Known RBP	13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TNNI1	P19237	187 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	LRPAP1	P30533	357 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	MAN2A1	Q16706	1144 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	C1orf220	Q5T0J3	134 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	LUZP1	Q86V48	1076 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	EFCAB13	Q8IY85	973 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	PLEKHO2	Q8TD55	490 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	ANKRD36BP1	Q96IX9	119 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TMEM175	Q9BSA9	504 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TMEM8A	Q9HCN3	771 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	ITGA11	Q9UKX5	1188 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	INPP5F	Q9Y2H2	1132 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	PCDHA11	Q9Y5I1	949 aa		13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	TRIP12	Q14669	1992 aa	Predicted RBP	13.59	□□□□□ -0.23
GSKIP-204	ENST00000555088	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	TLL1	O43897	1013 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	NFIC	P08651	508 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	TMEM191B	P0C7N4	346 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	CDK11B	P21127	795 aa	Known RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	IBSP	P21815	317 aa	Predicted RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	MTIF2	P46199	727 aa	Known RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	AFF1	P51825	1210 aa	Known RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	WNT7B	P56706	349 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	TFAM	Q00059	246 aa	Known RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	RNASEL	Q05823	741 aa	Known RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	BTG3	Q14201	252 aa	Predicted RBP	13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	RAB30	Q15771	203 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	ZACN	Q401N2	412 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	KRT39	Q6A163	491 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	C15orf39	Q6ZRI6	1047 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	FIBCD1	Q8N539	461 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	TUBGCP2	Q9BSJ2	902 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	MIOS	Q9NXC5	875 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	PLAGL2	Q9UPG8	496 aa		13.58	□□□□□ -0.24
GSKIP-204	ENST00000555088	ANO9	A1A5B4	782 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	GTPBP10	A4D1E9	387 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	STAU1	O95793	577 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	POMC	P01189	267 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	AFP	P02771	609 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	C4BPA	P04003	597 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	NUDT7	P0C024	238 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TRIM49	P0CI25	452 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TRIM49C	P0CI26	452 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	LAG3	P18627	525 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	PNPLA4	P41247	253 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	DLG4	P78352	724 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	RBP5	P82980	135 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	CETN1	Q12798	172 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	KRT31	Q15323	416 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	VWA3B	Q502W6	1294 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	PRPF38B	Q5VTL8	546 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TCERG1L	Q5VWI1	586 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	SMYD5	Q6GMV2	418 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	SV2A	Q7L0J3	742 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TRAPPC11	Q7Z392	1133 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	COLGALT2	Q8IYK4	626 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	LRRC52	Q8N7C0	313 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	OR5B17	Q8NGF7	314 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TAF4B	Q92750	862 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	CLP1	Q92989	425 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	FAM193B	Q96PV7	902 aa	Predicted RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	POP1	Q99575	1024 aa	Known RBP	13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	CXCL16	Q9H2A7	254 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	AAAS	Q9NRG9	546 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	DPP3	Q9NY33	737 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	STK39	Q9UEW8	545 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	COQ4	Q9Y3A0	265 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	RWDD3	Q9Y3V2	267 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	EVPL	Q92817	2033 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	PTPRJ	Q12913	1337 aa		13.57	□□□□□ -0.24
GSKIP-204	ENST00000555088	TMEM189-UBE2V1	I3L0A0	370 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	RBAK-RBAKDN	I3L0D1	243 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	PIR	O00625	290 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	ATIC	P31939	592 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	FMO5	P49326	533 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	GATM	P50440	423 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	MXI1	P50539	228 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	SMAD3	P84022	425 aa	Known RBP	13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	SOX4	Q06945	474 aa	Predicted RBP	13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	PPP3CA	Q08209	521 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	KCNH2	Q12809	1159 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	GLRA4	Q5JXX5	417 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	FAM117B	Q6P1L5	589 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	DCLRE1A	Q6PJP8	1040 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	APTX	Q7Z2E3	356 aa	Known RBP	13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	GAS2L3	Q86XJ1	694 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	C1orf127	Q8N9H9	656 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	CXorf38	Q8TB03	319 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	ZNF516	Q92618	1163 aa		13.56	□□□□□ -0.24
GSKIP-204	ENST00000555088	C18orf25	Q96B23	403 aa	Predicted RBP	13.56	□□□□□ -0.24

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