RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 TMEM130Q8N3G9 435 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 KLHL5Q96PQ7 755 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 ASB2Q96Q27 587 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 RXFP1Q9HBX9 757 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 CLEC1BQ9P126 229 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 UBQLN1Q9UMX0 589 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 SSX2IPQ9Y2D8 614 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 DERAQ9Y315 318 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 SF3B1O75533 1304 aaKnown RBP eCLIP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 PLXNA4Q9HCM2 1894 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 BDP1A6H8Y1 2624 aa14.02□□□□□ -0.16
MTHFD1-208ENST00000554739 BRWD1Q9NSI6 2320 aa14.02□□□□□ -0.16
MTHFD1-208ENST00000554739 H3BQ06 376 aaPredicted RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 C2CD2LO14523 706 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 IL18RAPO95256 599 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 URODP06132 367 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 NFICP08651 508 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 CNPP09543 421 aaKnown RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 LRPAP1P30533 357 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 CA8P35219 290 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 WNT7BP56706 349 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 RTP2Q5QGT7 225 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 KIAA1841Q6NSI8 718 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 EP400NLQ6ZTU2 488 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 BRSK2Q8IWQ3 736 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 GPD1LQ8N335 351 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 SPATA20Q8TB22 786 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 FBXL18Q96ME1 805 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 CGNQ9P2M7 1197 aaKnown RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 C2CD2Q9Y426 696 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 TTC28Q96AY4 2481 aa14.02□□□□□ -0.17
MTHFD1-208ENST00000554739 FSD2A1L4K1 749 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 CLIC2O15247 247 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 TRAPPC3O43617 180 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 TBX10O75333 385 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 BMP1P13497 986 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 FGFR3P22607 806 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 BRCC3P46736 316 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 GUCY2FP51841 1108 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 UBE2HP62256 183 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 ELAVL2Q12926 359 aaKnown RBP14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 TMEM132DQ14C87 1099 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 HS2ST1Q7LGA3 356 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 CBWD2Q8IUF1 395 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 C12orf56Q8IXR9 622 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 GOLGA5Q8TBA6 731 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 LNX1Q8TBB1 728 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 TMEM174Q8WUU8 243 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 MSLNLQ96KJ4 702 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 TTPALQ9BTX7 342 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 EMILIN2Q9BXX0 1053 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 KCTD10Q9H3F6 313 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 KIAA1586Q9HCI6 787 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 RBAKQ9NYW8 714 aaPredicted RBP14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 HCFC2Q9Y5Z7 792 aa14.01□□□□□ -0.17
MTHFD1-208ENST00000554739 ZNF233A6NK53 670 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 I3L4J1 428 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 PDXKO00764 312 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 TEX28O15482 410 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 KINO60870 393 aaKnown RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 KLRC2P26717 231 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 NDUFV1P49821 464 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 KCNQ1P51787 676 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 LLGL2Q6P1M3 1020 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 PDZRN4Q6ZMN7 1036 aaPredicted RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 CEP57Q86XR8 500 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 NT5DC4Q86YG4 428 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 EFCAB13Q8IY85 973 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 XXYLT1Q8NBI6 393 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 BEST2Q8NFU1 509 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 ERCC4Q92889 916 aaPredicted RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 GSDMAQ96QA5 445 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14□□□□□ -0.17
MTHFD1-208ENST00000554739 HOOK1Q9UJC3 728 aaKnown RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 BARX2Q9UMQ3 279 aaPredicted RBP14□□□□□ -0.17
MTHFD1-208ENST00000554739 MAPK8IP1Q9UQF2 711 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 PCDHA5Q9Y5H7 936 aa14□□□□□ -0.17
MTHFD1-208ENST00000554739 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 ANO9A1A5B4 782 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 PIRO00625 290 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 PPEF2O14830 753 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 SMC2O95347 1197 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 EPCAMP16422 314 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 CYP2J2P51589 502 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 CLCN4P51793 760 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 SNRNP35Q16560 246 aaKnown RBP13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 TJAP1Q5JTD0 557 aa13.99□□□□□ -0.17
MTHFD1-208ENST00000554739 C9orf57Q5W0N0 161 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms