RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 DCLRE1AQ6PJP8 1040 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 DDX53Q86TM3 631 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 BEST2Q8NFU1 509 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 DUSP9Q99956 384 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 VN1R3Q9BXE9 311 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 ADAM28Q9UKQ2 775 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 TDRD15B5MCY1 1934 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 BICDL2A1A5D9 508 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 PODXLO00592 558 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 CETN3O15182 167 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 CD300LGQ6UXG3 332 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 WDR49Q8IV35 697 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 TMEM130Q8N3G9 435 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 POF1BQ8WVV4 589 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 MKNK1Q9BUB5 465 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 LMCD1Q9NZU5 365 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 STK39Q9UEW8 545 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 PUF60Q9UHX1 559 aaKnown RBP23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 PTPRJQ12913 1337 aa23.21■■□□□ 1.31
SDR39U1-208ENST00000554698 COL4A4P53420 1690 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 B3GAT3O94766 335 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 IGFBP6P24592 240 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 PSMC2P35998 433 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 GUCY2FP51841 1108 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 MCCD1P59942 119 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 CLDN10P78369 228 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 TFAMQ00059 246 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 PTPROQ16827 1216 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 SKOR2Q2VWA4 1001 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 RNF168Q8IYW5 571 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 C3orf58Q8NDZ4 430 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 PLEKHO2Q8TD55 490 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 PARD3BQ8TEW8 1205 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 CACTINQ8WUQ7 758 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 CCDC127Q96BQ5 260 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 MRPL38Q96DV4 380 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 EEF2KMTQ96G04 330 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 GAS2L1Q99501 681 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 CGRRF1Q99675 332 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 INTS13Q9NVM9 706 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 RWDD2AQ9UIY3 292 aa23.2■■□□□ 1.3
SDR39U1-208ENST00000554698 ANO9A1A5B4 782 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 FAM186BQ8IYM0 893 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 TMC2Q8TDI7 906 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 MYLIPQ8WY64 445 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 BORCS6Q96GS4 357 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 MED15Q96RN5 788 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 FNBP1Q96RU3 617 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 DPP3Q9NY33 737 aa23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 PDCD11Q14690 1871 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-208ENST00000554698 TRIP11Q15643 1979 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 SLC16A3O15427 465 aaKnown RBP23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 TADA2AO75478 443 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 DLATP10515 647 aaKnown RBP23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 STX17P56962 302 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 ENPEPQ07075 957 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 C9orf57Q5W0N0 161 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 FUT10Q6P4F1 479 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 INTS8Q75QN2 995 aaKnown RBP23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 OR5B17Q8NGF7 314 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 CXorf38Q8TB03 319 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 HASPINQ8TF76 798 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 FAM84AQ96KN4 292 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 CEP63Q96MT8 703 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 POP1Q99575 1024 aaKnown RBP23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 GPR62Q9BZJ7 368 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 MTMR12Q9C0I1 747 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 TLR9Q9NR96 1032 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 DACH1Q9UI36 760 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 MTCH2Q9Y6C9 303 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 ANK1P16157 1881 aa23.18■■□□□ 1.3
SDR39U1-208ENST00000554698 TULP1O00294 542 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 PIRO00625 290 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 FSCN2O14926 492 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 SF3B1O75533 1304 aaKnown RBP eCLIP23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 ERCC5P28715 1186 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 ERVFC1P60507 584 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 NFKBIBQ15653 356 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 CT47A1Q5JQC4 288 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 LMBRD2Q68DH5 695 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 SASS6Q6UVJ0 657 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 VPS52Q8N1B4 723 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 CSGALNACT2Q8N6G5 542 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 C1orf127Q8N9H9 656 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 ZBP1Q9H171 429 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 ITGA11Q9UKX5 1188 aa23.17■■□□□ 1.3
SDR39U1-208ENST00000554698 LRRIQ3A6PVS8 624 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 PPEF2O14830 753 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 SOD2P04179 222 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 TMEM191BP0C7N4 346 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 EPB41P11171 864 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 TNNI1P19237 187 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 DLG4P78352 724 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 PDE12Q6L8Q7 609 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 ZNF516Q92618 1163 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 ANKRD36BP1Q96IX9 119 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 HERC2P3Q9BVR0 1158 aa23.16■■□□□ 1.3
SDR39U1-208ENST00000554698 TNNC2P02585 160 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms