RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HSCBQ8IWL3 235 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 ELOA2Q8IYF1 753 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 MYOCDQ8IZQ8 938 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 NLGN4XQ8N0W4 816 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 LRRC47Q8N1G4 583 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 DRAXINQ8NBI3 349 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC26Q8TAB7 109 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 HDAC7Q8WUI4 952 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 SREK1Q8WXA9 508 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC47Q96A33 483 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 PANK2Q9BZ23 570 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 TRIM8Q9BZR9 551 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 IKZF4Q9H2S9 585 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 INCENPQ9NQS7 918 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 TMOD4Q9NZQ9 345 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 BTBD7Q9P203 1132 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 KLHL42Q9P2K6 505 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 ODF2LQ9ULJ1 636 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 ATP23Q9Y6H3 246 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 MORC2Q9Y6X9 1032 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 SMG6Q86US8 1419 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 ANKRD31Q8N7Z5 1873 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 INSRP06213 1382 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 KDRP35968 1356 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 IBTKQ9P2D0 1353 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 WNT9AO14904 365 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 ARHGAP6O43182 974 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 ADCY3O60266 1144 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 IGHDP01880 384 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 C4BPAP04003 597 aaKnown RBP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC159P0C7I6 412 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 SRGAP2CP0DJJ0 459 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 U2AF1L5P0DN76 240 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 AOAHP28039 575 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 PRPHP41219 470 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 U2AF1Q01081 240 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 FOXL1Q12952 345 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 NFYCQ13952 458 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 RAB33AQ14088 237 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 DCTN1Q14203 1278 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 RBBP5Q15291 538 aaKnown RBP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 E2F5Q15329 346 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 SEC23AQ15436 765 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 DEFB115Q30KQ5 88 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC184Q52MB2 194 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 NAALADL2Q58DX5 795 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 FOXB2Q5VYV0 432 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 LRSAM1Q6UWE0 723 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 ZNF662Q6ZS27 426 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 C11orf96Q7Z7L8 435 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 TTC30BQ8N4P2 665 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 C1orf131Q8NDD1 294 aaKnown RBP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 STAG1Q8WVM7 1258 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 FBXW5Q969U6 566 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 SCYL1Q96KG9 808 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 GBP4Q96PP9 640 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 SPATA9Q9BWV2 254 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 INO80BQ9C086 356 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-227ENST00000554491 IFT122Q9HBG6 1241 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 GALNT8Q9NY28 637 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 C11orf21Q9P2W6 132 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 USP25Q9UHP3 1055 aa5.01□□□□□ -1.61
ATXN3-227ENST00000554491 CD163L1Q9NR16 1453 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TJP1Q07157 1748 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 PCDH11XQ9BZA7 1347 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 PCDH11YQ9BZA8 1340 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 PRAMEF25A6NGN4 478 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 MPIG6BO95866 241 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TPM1P09493 284 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 C6orf222P0C671 652 aaPredicted RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 ACRV1P26436 265 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CHRNA5P30532 468 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CYP2C19P33261 490 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 RDXP35241 583 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 MSX2P35548 267 aaPredicted RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 HNRNPH2P55795 449 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 TMF1P82094 1093 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CD83Q01151 205 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 KRTAP1-1Q07627 177 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 EIF4HQ15056 248 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 STILQ15468 1287 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TBC1D25Q3MII6 688 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TTC31Q49AM3 519 aaPredicted RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 FAM209AQ5JX71 171 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 FNDC7Q5VTL7 733 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC70Q6NSX1 233 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 LEKR1Q6ZMV7 388 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 DPH6Q7L8W6 267 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 UBE2Q1Q7Z7E8 422 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 PCGF5Q86SE9 256 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 GPR135Q8IZ08 494 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 PDILTQ8N807 584 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CACTINQ8WUQ7 758 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 ANKRD7Q92527 254 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 FAM89AQ96GI7 184 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 CAPNS2Q96L46 248 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 GMLQ99445 158 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms