RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 AFAP1L2Q8N4X5 818 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 METTL13Q8N6R0 699 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 UHMK1Q8TAS1 419 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TCP11Q8WWU5 503 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 EDARADDQ8WWZ3 215 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CCT6BQ92526 530 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PLPPR2Q96GM1 343 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 LPIN3Q9BQK8 851 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM51Q9BSJ1 452 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ISCUQ9H1K1 167 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 IGFLR1Q9H665 355 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MCM9Q9NXL9 1143 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TFCP2L1Q9NZI6 479 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 REV1Q9UBZ9 1251 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 BAIAP2L1Q9UHR4 511 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM59LQ9UK28 342 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PNMA2Q9UL42 364 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PCDHGC5Q9Y5F6 944 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SHANK3Q9BYB0 1731 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SSU72P8A0A1W2PR75 194 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 A8MUI8 341 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TMCO5BA8MYB1 307 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TRAF5O00463 557 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 KRIT1O00522 736 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 HGSO14964 777 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 EDIL3O43854 480 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 KIF1CO43896 1103 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MGRN1O60291 552 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CTNND1O60716 968 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PEX14O75381 377 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ATP6V1G2O95670 118 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SERPING1P05155 500 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MYL1P05976 194 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CTSBP07858 339 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CLTAP09496 248 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MYCLP1P12525 358 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CPB1P15086 417 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ATF3P18847 181 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 L1CAMP32004 1257 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 IGHMBP2P38935 993 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CCNHP51946 323 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NAPAP54920 295 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 KLHL30Q0D2K2 578 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 MYO1EQ12965 1108 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PLCB4Q15147 1175 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 RPS6KA1Q15418 735 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PPP1R7Q15435 360 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SLC18A3Q16572 532 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 KRT71Q3SY84 523 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF468Q5VIY5 522 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 YOD1Q5VVQ6 348 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TLDC1Q6P9B6 456 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SMIM5Q71RC9 77 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NLRC3Q7RTR2 1065 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF571Q7Z3V5 609 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TMC3Q7Z5M5 1100 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TBC1D1Q86TI0 1168 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 FAM35AQ86V20 835 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PNMA8AQ86V59 439 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 RNF10Q8N5U6 811 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 TBCKQ8TEA7 893 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 SCFD2Q8WU76 684 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ANKS1AQ92625 1134 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 PRCCQ92733 491 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC47Q96A33 483 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NSUN4Q96CB9 384 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 WDR89Q96FK6 387 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 BRIP1Q9BX63 1249 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NOD2Q9HC29 1040 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGEF4Q9NR80 690 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 BARHL2Q9NY43 387 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 STX8Q9UNK0 236 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 AGAP1Q9UPQ3 857 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 NOC2LQ9Y3T9 749 aaKnown RBP2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ATP6V0A2Q9Y487 856 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 LRP5O75197 1615 aa2.77□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD36CQ5JPF3 1778 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CASZ1Q86V15 1759 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 EME2A4GXA9 379 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SMCO2A6NFE2 343 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 C5orf60A6NFR6 353 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FOXO6A8MYZ6 492 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 F8VZ95 297 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PPIP5K2O43314 1243 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TPD52L2O43399 206 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ORC4O43929 436 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF862O60290 1169 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SIN3BO75182 1162 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 RTN2O75298 545 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TDP2O95551 362 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 EYA4O95677 639 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 APBA3O96018 575 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZBTB48P10074 688 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ARAFP10398 606 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 EZRP15311 586 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CHN1P15882 459 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SLC9A1P19634 815 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KIF5BP33176 963 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IFNAR2P48551 515 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms