RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SCN4AP35499 1836 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 PGRMC1O00264 195 aaKnown RBP15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 EXTL3O43909 919 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ADCY3O60266 1144 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ADCYAP1R1P41586 468 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 GALCP54803 685 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 MAGOHP61326 146 aaKnown RBP15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 LAMTOR4Q0VGL1 99 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 CUL1Q13616 776 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ZNF792Q3KQV3 632 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 C10orf76Q5T2E6 689 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 TPCN2Q8NHX9 752 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ACTRT1Q8TDG2 376 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ZNF516Q92618 1163 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 TATDN2Q93075 761 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 MAGOHBQ96A72 148 aaKnown RBP15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
PPP4R3A-201ENST00000554308 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 CYP26A1O43174 497 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 SPRYD7Q5W111 196 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 PLPPR4Q7Z2D5 763 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 SEC16BQ96JE7 1060 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 NLRP4Q96MN2 994 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 PPP1R16BQ96T49 567 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■□□□ 13.5
PPP4R3A-201ENST00000554308 TRIM51Q9BSJ1 452 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 SMARCAD1Q9H4L7 1026 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 BHMG1C9JSJ3 638 aaPredicted RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 CLDN3O15551 220 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 LGR5O75473 907 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 CLCN3P51790 818 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 PPP2R2AP63151 447 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 PRPF4BQ13523 1007 aaKnown RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 TAPT1Q6NXT6 567 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 SLC30A5Q8TAD4 765 aa15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
PPP4R3A-201ENST00000554308 CSDE1O75534 798 aaKnown RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 SGPL1O95470 568 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 RFX1P22670 979 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 DHX9Q08211 1270 aaKnown RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 BIRC3Q13489 604 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ANKRD20A8PQ5CZ79 823 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 IER5Q5VY09 327 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 CST9Q5W186 159 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 TMC3Q7Z5M5 1100 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 SLC47A2Q86VL8 602 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 FAM228AQ86W67 206 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 CDR2LQ86X02 465 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ARFGAP2Q8N6H7 521 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 MORC4Q8TE76 937 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 LRRC45Q96CN5 670 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 PBKQ96KB5 322 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ZNFX1Q9P2E3 1918 aaKnown RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 GOLGA6L7A0A1B0GV03 622 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ABCD1P33897 745 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 GCLCP48506 637 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 MFAP3P55082 362 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ARHGAP1Q07960 439 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 KIF22Q14807 665 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 KRT71Q3SY84 523 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 PEX26Q7Z412 305 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 OLIG1Q8TAK6 271 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 GTF3C2Q8WUA4 911 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 NT5C1BQ96P26 610 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 AGPAT1Q99943 283 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 PTPRJQ12913 1337 aa15.68■□□□□ 0.1
PPP4R3A-201ENST00000554308 STRNO43815 780 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 CALCAP01258 141 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 ZNF286BP0CG31 522 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 GPC3P51654 580 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 HUNKP57058 714 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 SLFN12LQ6IEE8 588 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 HELQQ8TDG4 1101 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 KIAA1586Q9HCI6 787 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 NMRK2Q9NPI5 230 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 ERAP1Q9NZ08 941 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 GGA2Q9UJY4 613 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 COQ4Q9Y3A0 265 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 A0A0B4J269 797 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 INO80B-WBP1J3KQ70 363 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 CES2O00748 559 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 CHUKO15111 745 aa15.67■□□□□ 0.1
PPP4R3A-201ENST00000554308 FKBP1BP68106 108 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms