RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FCER1AP12319 257 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PPARGP37231 505 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 VCPP55072 806 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 TIMM10P62072 90 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 KLHL30Q0D2K2 578 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 E2F2Q14209 437 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 C16orf72Q14CZ0 275 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 POTEHQ6S545 545 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 DHDDSQ86SQ9 333 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 SRRM1Q8IYB3 904 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 KIAA0895Q8NCT3 520 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PTCD2Q8WV60 388 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 EME1Q96AY2 570 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 KLHL4Q9C0H6 718 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 NAPBQ9H115 298 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PARVBQ9HBI1 364 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 THEGQ9P2T0 379 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PCYOX1Q9UHG3 505 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 FBXO9Q9UK97 447 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 DIS3Q9Y2L1 958 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 PCDHB2Q9Y5E7 798 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 AK5Q9Y6K8 562 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 CFAP69A5D8W1 941 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 DNAJC6O75061 913 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 FKBP6O75344 327 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 OCM2P0CE71 109 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 OCMP0CE72 109 aaPredicted RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 FGFR1P11362 822 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 HOXD10P28358 340 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 CREB5Q02930 508 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 PDE4DQ08499 809 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 PTK7Q13308 1070 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 NCOA4Q13772 614 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 LRP8Q14114 963 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 ASIC2Q16515 512 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 MAP3K21Q5TCX8 1036 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 FYB2Q5VWT5 728 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 NIPAL1Q6NVV3 410 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 EPM2AIP1Q7L775 607 aaPredicted RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 DNAAF5Q86Y56 855 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 SYCE1Q8N0S2 351 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 TTC39CQ8N584 583 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 ALLCQ8N6M5 410 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.1□□□□□ -0.79
SIX4-202ENST00000554079 C4orf32Q8N8J7 132 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 DDHD1Q8NEL9 900 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 SH3RF3Q8TEJ3 882 aaPredicted RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 SKA1Q96BD8 255 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 C18orf8Q96DM3 657 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 BTBD9Q96Q07 612 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 GPATCH1Q9BRR8 931 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 LSM14BQ9BX40 385 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 ARMC7Q9H6L4 198 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 ZNF696Q9H7X3 374 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 C17orf75Q9HAS0 396 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 VTA1Q9NP79 307 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 DNAJC17Q9NVM6 304 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 TRNAU1APQ9NX07 287 aaKnown RBP10.1□□□□□ -0.79
SIX4-202ENST00000554079 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 TACC3Q9Y6A5 838 aa10.1□□□□□ -0.79
SIX4-202ENST00000554079 LAMB2P55268 1798 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 PCDH11YQ9BZA8 1340 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ANKRD34BA5PLL1 514 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 TTLL13PA6NNM8 815 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 TMEM114B3SHH9 223 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 H3BSA7 217 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 SPAG7O75391 227 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ZNF12P17014 697 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 CDH3P22223 829 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 PHBP35232 272 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 HSD17B4P51659 736 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NPEPPSP55786 919 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NOP14P78316 857 aaKnown RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 CD300CQ08708 224 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 IFIT5Q13325 482 aaKnown RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 RAPGEF1Q13905 1077 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 PCNX4Q63HM2 1172 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 LPCAT4Q643R3 524 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 FAM91A1Q658Y4 838 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ARL6IP4Q66PJ3 421 aaKnown RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 TTC27Q6P3X3 843 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 AAGABQ6PD74 315 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ANO5Q75V66 913 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ZNF571Q7Z3V5 609 aaPredicted RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 TMC7Q7Z402 723 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 TMCO5AQ8N6Q1 288 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 RFWD2Q8NHY2 731 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 MRPL1Q9BYD6 325 aaKnown RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms