RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 TRIM59Q8IWR1 403 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 CMTR2Q8IYT2 770 aaKnown RBP10.06□□□□□ -0.8
NUMB-208ENST00000554014 ABI1Q8IZP0 508 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 LRRC43Q8N309 656 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 YME1L1Q96TA2 773 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 CGRRF1Q99675 332 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 PAAF1Q9BRP4 392 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 NAT10Q9H0A0 1025 aaKnown RBP10.06□□□□□ -0.8
NUMB-208ENST00000554014 ASB7Q9H672 318 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 CWH43Q9H720 699 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 C2CD2Q9Y426 696 aa10.06□□□□□ -0.8
NUMB-208ENST00000554014 F8W810 466 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 TLL1O43897 1013 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
NUMB-208ENST00000554014 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
NUMB-208ENST00000554014 PBX3P40426 434 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 VAMP7P51809 220 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 CCDC40Q4G0X9 1142 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 INTS8Q75QN2 995 aaKnown RBP10.05□□□□□ -0.8
NUMB-208ENST00000554014 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 CXorf38Q8TB03 319 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 RAD9AQ99638 391 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 ARMCX3Q9UH62 379 aaPredicted RBP10.05□□□□□ -0.8
NUMB-208ENST00000554014 DERAQ9Y315 318 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
NUMB-208ENST00000554014 CASTOR2A6NHX0 329 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 KCNJ18B7U540 433 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 PPEF2O14830 753 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 THP07101 528 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 CA3P07451 260 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 ENPEPQ07075 957 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 BTG3Q14201 252 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 KCNJ12Q14500 433 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 DCAF17Q5H9S7 520 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 TDRD10Q5VZ19 366 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 C15orf39Q6ZRI6 1047 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 APTXQ7Z2E3 356 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 CD302Q8IX05 232 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 C3orf58Q8NDZ4 430 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 MRPL9Q9BYD2 267 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 SIX4Q9UIU6 781 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 ZC3H11AO75152 810 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUMB-208ENST00000554014 FGFR1OPO95684 399 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 CAVIN2O95810 425 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 GNA14O95837 355 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 SLC11A1P49279 550 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 TUSC3Q13454 348 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 CBWD6Q4V339 395 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 TCP11X2Q5H9J9 407 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 CBWD3Q5JTY5 395 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 CBWD5Q5RIA9 395 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 BCL7CQ8WUZ0 217 aaPredicted RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 RSPH1Q8WYR4 309 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 CLP1Q92989 425 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 UBQLN1Q9UMX0 589 aaKnown RBP10.04□□□□□ -0.8
NUMB-208ENST00000554014 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
NUMB-208ENST00000554014 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.03□□□□□ -0.8
NUMB-208ENST00000554014 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.03□□□□□ -0.8
NUMB-208ENST00000554014 A0A1W2PPC1 479 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 ANO9A1A5B4 782 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 LRRN2O75325 713 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 KIF4AO95239 1232 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 VNN1O95497 513 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 C4BPAP04003 597 aaKnown RBP10.03□□□□□ -0.8
NUMB-208ENST00000554014 ITGB1P05556 798 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 KRT13P13646 458 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 TNNI1P19237 187 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 LRPAP1P30533 357 aa10.03□□□□□ -0.8
NUMB-208ENST00000554014 GCLMP48507 274 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms