RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 DUSP6Q16828 381 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
CHD8-206ENST00000553870 ZBTB41Q5SVQ8 909 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 ZNF658Q5TYW1 1059 aaPredicted RBP10.13□□□□□ -0.79
CHD8-206ENST00000553870 PLPP4Q5VZY2 271 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 JADE1Q6IE81 842 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 NELFCDQ8IXH7 590 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 FAM212AQ96EL1 285 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PAAF1Q9BRP4 392 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 TTPALQ9BTX7 342 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 VN1R3Q9BXE9 311 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 GPR62Q9BZJ7 368 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 KCTD10Q9H3F6 313 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PCIF1Q9H4Z3 704 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 RBAKQ9NYW8 714 aaPredicted RBP10.13□□□□□ -0.79
CHD8-206ENST00000553870 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 THEGQ9P2T0 379 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 TRAF3IP3Q9Y228 551 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 PCDHA5Q9Y5H7 936 aa10.13□□□□□ -0.79
CHD8-206ENST00000553870 CITO14578 2027 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 ARHGEF37A1IGU5 675 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 HIDE1A8MVS5 230 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 GOLGA6L22H0YM25 854 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 SYN3O14994 580 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 MAPK13O15264 365 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 CALUO43852 315 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 CLASP2O75122 1294 aaKnown RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 KIF4AO95239 1232 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 FGFR3P22607 806 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 RPL13P26373 211 aaKnown RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 NRIP1P48552 1158 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 MRPS5P82675 430 aaKnown RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 SOX4Q06945 474 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 KCNC3Q14003 757 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 FAM171A1Q5VUB5 890 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 CD300LGQ6UXG3 332 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 PIK3R5Q8WYR1 880 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 MFSD14AQ96MC6 490 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 KLHL5Q96PQ7 755 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 OXCT2Q9BYC2 517 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 IKZF4Q9H2S9 585 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 UBE2ZQ9H832 354 aaPredicted RBP10.12□□□□□ -0.79
CHD8-206ENST00000553870 DMAC2Q9NW81 257 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 DPP7Q9UHL4 492 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 NUB1Q9Y5A7 615 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 MYO7AQ13402 2215 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 TRANK1O15050 2925 aa10.12□□□□□ -0.79
CHD8-206ENST00000553870 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 ANO9A1A5B4 782 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 PIRO00625 290 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 CLIC2O15247 247 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 EXOC3O60645 756 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 ADH1AP07327 375 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 CNPP09543 421 aaKnown RBP10.11□□□□□ -0.79
CHD8-206ENST00000553870 HOXB8P17481 243 aaPredicted RBP10.11□□□□□ -0.79
CHD8-206ENST00000553870 PNPLA4P41247 253 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 AARSP49588 968 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD8-206ENST00000553870 AP3M2P53677 418 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 ENPEPQ07075 957 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 SNRNP35Q16560 246 aaKnown RBP10.11□□□□□ -0.79
CHD8-206ENST00000553870 DUOXA2Q1HG44 320 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 LEXMQ3ZCV2 418 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 C9orf57Q5W0N0 161 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 ELMSAN1Q6PJG2 1045 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 ANKS3Q6ZW76 656 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 TAS1R1Q7RTX1 841 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 USP37Q86T82 979 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 RBM23Q86U06 439 aaKnown RBP10.11□□□□□ -0.79
CHD8-206ENST00000553870 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.11□□□□□ -0.792e-10■■■■■ 27.5
CHD8-206ENST00000553870 TRIML1Q8N9V2 468 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 APPL2Q8NEU8 664 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 RIN2Q8WYP3 895 aaPredicted RBP10.11□□□□□ -0.79
CHD8-206ENST00000553870 CASP10Q92851 521 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 SAAL1Q96ER3 474 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 SUSD3Q96L08 255 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 IGFLR1Q9H665 355 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 GOLGA2P5Q9HBQ8 144 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 DPP3Q9NY33 737 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 FAM50BQ9Y247 325 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 BACE2Q9Y5Z0 518 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 TRIP11Q15643 1979 aa10.11□□□□□ -0.79
CHD8-206ENST00000553870 GOLGA8IPA6NC78 632 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 GOLGA8JA6NMD2 632 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 F8W810 466 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 H7C4K7 107 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 M0QZQ0 153 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 PER2O15055 1255 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 NR3C1P04150 777 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 NFICP08651 508 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 KLRC2P26717 231 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 CA8P35219 290 aa10.1□□□□□ -0.79
CHD8-206ENST00000553870 LTBRP36941 435 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms