RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NR2E1Q9Y466 385 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 A0A1B0GTH6 734 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 SMIM35A0A1B0GVV1 85 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 MBLAC1A4D2B0 266 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-208ENST00000553868 KIAA0391O15091 583 aaKnown RBP15.73■□□□□ 0.11
SHMT2-208ENST00000553868 PTMAP06454 111 aaKnown RBP15.73■□□□□ 0.11
SHMT2-208ENST00000553868 SRGAP2CP0DJJ0 459 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 HOXB3P14651 431 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-208ENST00000553868 LIG4P49917 911 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 MARSP56192 900 aaKnown RBP15.73■□□□□ 0.11
SHMT2-208ENST00000553868 DRP2Q13474 957 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 KCNC3Q14003 757 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 MAPK6Q16659 721 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 ARMCX5Q6P1M9 558 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 ZNF410Q86VK4 478 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 LINC01599Q8WXQ3 324 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 NLRP4Q96MN2 994 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 TUBGCP2Q9BSJ2 902 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 LIMD1Q9UGP4 676 aa15.73■□□□□ 0.11
SHMT2-208ENST00000553868 HNRNPDLO14979 420 aaKnown RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 EXOC3O60645 756 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 PIGRP01833 764 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 WEE2P0C1S8 567 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 GARTP22102 1010 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 PSMC2P35998 433 aaKnown RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 LPIN1Q14693 890 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 MAN2A1Q16706 1144 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 FAM26DQ5JW98 314 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 MARCH8Q5T0T0 291 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 FKBP15Q5T1M5 1219 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 CEP135Q66GS9 1140 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 ZPBP2Q6X784 338 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 IFNLR1Q8IU57 520 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 DMAC2Q9NW81 257 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 TAB2Q9NYJ8 693 aa15.72■□□□□ 0.11
SHMT2-208ENST00000553868 ARMCX3Q9UH62 379 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-208ENST00000553868 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 CLIC2O15247 247 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 CAND2O75155 1236 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 CYP2J2P51589 502 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 ATXN1P54253 815 aaKnown RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 PTENP60484 403 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 NR1I3Q14994 352 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 APTXQ7Z2E3 356 aaKnown RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 FAM186BQ8IYM0 893 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 NME8Q8N427 588 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 XXYLT1Q8NBI6 393 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 RUBCNQ92622 972 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 EEF2KMTQ96G04 330 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 NAP1L5Q96NT1 182 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 VPS16Q9H269 839 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 SEMA4AQ9H3S1 761 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 PRMT7Q9NVM4 692 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-208ENST00000553868 IMPACTQ9P2X3 320 aa15.71■□□□□ 0.11
SHMT2-208ENST00000553868 MAPK13O15264 365 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 PRKCBP05771 671 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 KRT13P13646 458 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-208ENST00000553868 ADAM17P78536 824 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 VWA3BQ502W6 1294 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 PLPP4Q5VZY2 271 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 TMEM184AQ6ZMB5 413 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 SRGAP1Q7Z6B7 1085 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 USP37Q86T82 979 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 RSPH3Q86UC2 560 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 RTN4RL1Q86UN2 441 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-208ENST00000553868 KIAA0319LQ8IZA0 1049 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 POMGNT1Q8WZA1 660 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-208ENST00000553868 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 ERVK-5Q9HDB9 667 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 HSPBP1Q9NZL4 362 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
SHMT2-208ENST00000553868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.7■□□□□ 0.1
SHMT2-208ENST00000553868 FAM208BQ5VWN6 2430 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 FASNP49327 2511 aaKnown RBP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 DCDC2BA2VCK2 349 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 INO80B-WBP1J3KQ70 363 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 AKAP3O75969 853 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 VTNP04004 478 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 GPC3P51654 580 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 UBXN1Q04323 297 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 PCBP1Q15365 356 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHMT2-208ENST00000553868 FAM187BQ17R55 369 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 RUFY4Q6ZNE9 571 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 TAS1R3Q7RTX0 852 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 VSTM4Q8IW00 320 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
SHMT2-208ENST00000553868 ZBTB10Q96DT7 871 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms