RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 SPATA1Q5VX52 437 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 ANKRD40Q6AI12 368 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 TMEM173Q86WV6 379 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 FAM186BQ8IYM0 893 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 MICAL1Q8TDZ2 1067 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 MYLIPQ8WY64 445 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 MRPL38Q96DV4 380 aaKnown RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 ANKRD36BP1Q96IX9 119 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 GUCD1Q96NT3 240 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 PAAF1Q9BRP4 392 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 ENTPD7Q9NQZ7 604 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 TLR9Q9NR96 1032 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 MARCH5Q9NX47 278 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 ADAM28Q9UKQ2 775 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 PDCD11Q14690 1871 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TMEM189-UBE2V1I3L0A0 370 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 MAPK13O15264 365 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TRAPPC3O43617 180 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 FGFR1OPO95684 399 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 CA8P35219 290 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 CASP4P49662 377 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 DUOXA2Q1HG44 320 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TIGD5Q53EQ6 642 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 PDE12Q6L8Q7 609 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 KIAA1841Q6NSI8 718 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 RBM43Q6ZSC3 357 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 INTS8Q75QN2 995 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TMC7Q7Z402 723 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 DDX53Q86TM3 631 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 VPS52Q8N1B4 723 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 BCL7CQ8WUZ0 217 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 PPP2R3CQ969Q6 453 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 MFSD14AQ96MC6 490 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 CGRRF1Q99675 332 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TCF25Q9BQ70 676 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 MKNK1Q9BUB5 465 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 DPP3Q9NY33 737 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 LMCD1Q9NZU5 365 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 LAMA2P24043 3122 aaKnown RBP14.98□□□□□ -0.01
TUBB3-202ENST00000553656 TRIP11Q15643 1979 aa14.98□□□□□ -0.01
TUBB3-202ENST00000553656 SLC16A3O15427 465 aaKnown RBP14.97□□□□□ -0.01
TUBB3-202ENST00000553656 AKAP3O75969 853 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 URODP06132 367 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 LRPAP1P30533 357 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 STX17P56962 302 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 TPD52L1Q16890 204 aaPredicted RBP14.97□□□□□ -0.01
TUBB3-202ENST00000553656 DPCR1Q3MIW9 517 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 FOXR2Q6PJQ5 311 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 MICALL1Q8N3F8 863 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 CSGALNACT2Q8N6G5 542 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 CEP63Q96MT8 703 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 MTMR12Q9C0I1 747 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 NGRNQ9NPE2 291 aaKnown RBP14.97□□□□□ -0.01
TUBB3-202ENST00000553656 INTS13Q9NVM9 706 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 ANO10Q9NW15 660 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 RWDD2AQ9UIY3 292 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 ITGA11Q9UKX5 1188 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
TUBB3-202ENST00000553656 F8W810 466 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-202ENST00000553656 SOD2P04179 222 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 KRT19P08727 400 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 ANK1P16157 1881 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 PAX3P23760 479 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 VAMP7P51809 220 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 AP3M2P53677 418 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 WNT7BP56706 349 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 ADGRE1Q14246 886 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 SMC1AQ14683 1233 aaKnown RBP14.96□□□□□ -0.01
TUBB3-202ENST00000553656 STX1AQ16623 288 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 PLPP4Q5VZY2 271 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 C9orf57Q5W0N0 161 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 LMBRD2Q68DH5 695 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-202ENST00000553656 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 TMC2Q8TDI7 906 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 EEF2KMTQ96G04 330 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 ZNF560Q96MR9 790 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 HERC2P3Q9BVR0 1158 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 PLXNA4Q9HCM2 1894 aa14.96□□□□□ -0.01
TUBB3-202ENST00000553656 ARHGEF37A1IGU5 675 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 PHACTR2O75167 634 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 CLSTN1O94985 981 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 ITGB3P05106 788 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 CTSAP10619 480 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 POU3F3P20264 500 aaPredicted RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 DNAJB1P25685 340 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 PNPLA4P41247 253 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 GLUD2P49448 558 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms