RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 P4HA2O15460 535 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 AFPP02771 609 aaKnown RBP20.89■□□□□ 0.93
PSEN1-207ENST00000553599 TRIM49P0CI25 452 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 TRIM49CP0CI26 452 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 LAG3P18627 525 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 CETN1Q12798 172 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 ZACNQ401N2 412 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 KRT39Q6A163 491 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 C15orf39Q6ZRI6 1047 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 TRAPPC11Q7Z392 1133 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 CLP1Q92989 425 aaKnown RBP20.89■□□□□ 0.93
PSEN1-207ENST00000553599 C18orf25Q96B23 403 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-207ENST00000553599 MTMR12Q9C0I1 747 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 CWH43Q9H720 699 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 NRDE2Q9H7Z3 1164 aa20.89■□□□□ 0.93
PSEN1-207ENST00000553599 R3HCC1Q9Y3T6 440 aaKnown RBP20.89■□□□□ 0.93
PSEN1-207ENST00000553599 TULP1O00294 542 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-207ENST00000553599 DDHD2O94830 711 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 C4BPAP04003 597 aaKnown RBP20.88■□□□□ 0.93
PSEN1-207ENST00000553599 ALDH2P05091 517 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 PPP3CAQ08209 521 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 KCNH2Q12809 1159 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 KRT31Q15323 416 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 HSP90AA4PQ58FG1 418 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 SV2AQ7L0J3 742 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 ZNF280BQ86YH2 543 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 ZNF516Q92618 1163 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 TUBGCP4Q9UGJ1 667 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 MSRAQ9UJ68 235 aa20.88■□□□□ 0.93
PSEN1-207ENST00000553599 MRPL42Q9Y6G3 142 aaKnown RBP20.88■□□□□ 0.93
PSEN1-207ENST00000553599 ANO9A1A5B4 782 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 PNPLA4P41247 253 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 GCLMP48507 274 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 FMO5P49326 533 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 ALDH7A1P49419 539 aaKnown RBP20.87■□□□□ 0.93
PSEN1-207ENST00000553599 MXI1P50539 228 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 RBP5P82980 135 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 SMAD3P84022 425 aaKnown RBP20.87■□□□□ 0.93
PSEN1-207ENST00000553599 SOX4Q06945 474 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-207ENST00000553599 BIRC3Q13489 604 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 UPP1Q16831 310 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-207ENST00000553599 FAM109BQ6ICB4 259 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-207ENST00000553599 DCLRE1AQ6PJP8 1040 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 C1orf127Q8N9H9 656 aa20.87■□□□□ 0.93
PSEN1-207ENST00000553599 GTPBP10A4D1E9 387 aaKnown RBP20.86■□□□□ 0.93
PSEN1-207ENST00000553599 TMEM189-UBE2V1I3L0A0 370 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 PIRO00625 290 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 ZC3H11AO75152 810 aaKnown RBP eCLIP20.86■□□□□ 0.93
PSEN1-207ENST00000553599 PHACTR2O75167 634 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 RABGGTBP53611 331 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 LRIT3Q3SXY7 679 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 SPOUT1Q5T280 376 aaKnown RBP20.86■□□□□ 0.93
PSEN1-207ENST00000553599 TDRD10Q5VZ19 366 aaKnown RBP20.86■□□□□ 0.93
PSEN1-207ENST00000553599 C9orf57Q5W0N0 161 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 GAS2L3Q86XJ1 694 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 LRRC52Q8N7C0 313 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 RNF214Q8ND24 703 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 ZNF560Q96MR9 790 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 ZNF558Q96NG5 402 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 SAMD11Q96NU1 681 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 COLEC11Q9BWP8 271 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 NDST4Q9H3R1 872 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 FAN1Q9Y2M0 1017 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 COQ4Q9Y3A0 265 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 PCDHB12Q9Y5F1 795 aa20.86■□□□□ 0.93
PSEN1-207ENST00000553599 CASTOR2A6NHX0 329 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 GRXCR1A8MXD5 290 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 PODXLO00592 558 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 ITGB3P05106 788 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 GALTP07902 379 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 ATP1A3P13637 1013 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 ATICP31939 592 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 PPM1AP35813 382 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 BCAR1P56945 870 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 MYO1EQ12965 1108 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 TRPC3Q13507 836 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 FILIP1LQ4L180 1135 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 MIIPQ5JXC2 388 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 KCNT2Q6UVM3 1135 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 FBXL13Q8NEE6 735 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 CXorf38Q8TB03 319 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 TAF4BQ92750 862 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 PBX4Q9BYU1 374 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 DNAJB4Q9UDY4 337 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
PSEN1-207ENST00000553599 LINC01553A4QN01 128 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 NRP1O14786 923 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 B4GALT3O60512 393 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 STAU1O95793 577 aaKnown RBP20.84■□□□□ 0.93
PSEN1-207ENST00000553599 OR1G1P47890 313 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 CLCNKBP51801 687 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 COPB1P53618 953 aaKnown RBP20.84■□□□□ 0.93
PSEN1-207ENST00000553599 MYL7Q01449 175 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 NCOA4Q13772 614 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 APTXQ7Z2E3 356 aaKnown RBP20.84■□□□□ 0.93
PSEN1-207ENST00000553599 COLGALT1Q8NBJ5 622 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 PLVAPQ9BX97 442 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms