RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 FAM13AO94988 1023 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 CLTAP09496 248 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 BRCC3P46736 316 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 AXDND1Q5T1B0 1012 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 CD300LGQ6UXG3 332 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 HAUS6Q7Z4H7 955 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 GRASPQ7Z6J2 395 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 TMEM105Q8N8V8 129 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 ZBTB45Q96K62 511 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 WNT16Q9UBV4 365 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 VPS37CA5D8V6 355 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 ANHXE9PGG2 379 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 CCL16O15467 120 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 KRT18P05783 430 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 SRFP11831 508 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 LIG4P49917 911 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 SLC10A6Q3KNW5 377 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 ARSHQ5FYA8 562 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 SLC44A3Q8N4M1 653 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 RTP3Q9BQQ7 232 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 CDH7Q9ULB5 785 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
SDR39U1-205ENST00000553546 NPHP3-ACAD11A0A0J9YXS1 232 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 I3L4J1 428 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 K7ENM7 598 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 HNRNPDLO14979 420 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 PLCG1P19174 1290 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 AOC1P19801 751 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 ELF1P32519 619 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 ZNF131P52739 623 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 HTR4Q13639 388 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 CWF19L1Q69YN2 538 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 MTSS1LQ765P7 747 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 ERMP1Q7Z2K6 904 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 SIX5Q8N196 739 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 MYCT1Q8N699 235 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 RAD54LQ92698 747 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 C18orf25Q96B23 403 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 SUSD3Q96L08 255 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 TSPAN18Q96SJ8 248 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
SDR39U1-205ENST00000553546 GVINP1Q7Z2Y8 2422 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 NARSO43776 548 aaKnown RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 TRAK2O60296 914 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 PIGRP01833 764 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 CFHP08603 1231 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 CXCL8P10145 99 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 RFX1P22670 979 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 IGFBP6P24592 240 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 MCM4P33991 863 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 ROR1Q01973 937 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 DHX8Q14562 1220 aaKnown RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 KARSQ15046 597 aaKnown RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 PABPC1LQ4VXU2 614 aaKnown RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 RSPO2Q6UXX9 243 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 ZNF461Q8TAF7 563 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 DOCK6Q96HP0 2047 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 BLOC1S4Q9NUP1 217 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 TBX20Q9UMR3 447 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
SDR39U1-205ENST00000553546 DMXL1Q9Y485 3027 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 TTC26A0AVF1 554 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 PRRG1O14668 218 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 MEFVO15553 781 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 LRG1P02750 347 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 CYP3A5P20815 502 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 NBL1P41271 181 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 NTHL1P78549 312 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 MRPL58Q14197 206 aaKnown RBP16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 MCM6Q14566 821 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 TPGS2Q68CL5 300 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 FGF13Q92913 245 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 OXCT2Q9BYC2 517 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 SLC2A4RGQ9NR83 387 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 STK17AQ9UEE5 414 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 MAFFQ9ULX9 164 aa16.48■□□□□ 0.23
SDR39U1-205ENST00000553546 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
SDR39U1-205ENST00000553546 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
SDR39U1-205ENST00000553546 OGTO15294 1046 aa16.47■□□□□ 0.23
SDR39U1-205ENST00000553546 TBC1D4O60343 1298 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms