RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 DDX6P26196 483 aaKnown RBP eCLIP8.63□□□□□ -1.03
PCNX1-205ENST00000553508 HSD11B2P80365 405 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
PCNX1-205ENST00000553508 LAIR1Q6GTX8 287 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 AMER2Q8N7J2 671 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 CHFRQ96EP1 664 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 MARS2Q96GW9 593 aaKnown RBP8.63□□□□□ -1.03
PCNX1-205ENST00000553508 WDR11Q9BZH6 1224 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 IKZF4Q9H2S9 585 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 AASDHPPTQ9NRN7 309 aa8.63□□□□□ -1.03
PCNX1-205ENST00000553508 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.63□□□□□ -1.03
PCNX1-205ENST00000553508 CKBP12277 381 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 FGFR4P22455 802 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 NOMO3P69849 1222 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 GUCY1B3Q02153 619 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 DPTQ07507 201 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 TP53BP2Q13625 1128 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 NOMO2Q5JPE7 1267 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 Q6ZPA2 131 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 LDLRAD3Q86YD5 345 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 RNF31Q96EP0 1072 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 ADAM2Q99965 735 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 VRK1Q99986 396 aaPredicted RBP8.62□□□□□ -1.03
PCNX1-205ENST00000553508 RNPEPQ9H4A4 650 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 FAM30AQ9NZY2 134 aa8.62□□□□□ -1.03
PCNX1-205ENST00000553508 SGTAO43765 313 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 RAMP2O60895 175 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 IL33O95760 270 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 CFIP05156 583 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 GCSHP23434 173 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 SLC6A4P31645 630 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 BMPR1AP36894 532 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 INHBCP55103 352 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 MXRA7P84157 204 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 OCA2Q04671 838 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 SPDYE7PQ495Y7 208 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 TMEM132CQ8N3T6 1108 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 CHMP4CQ96CF2 233 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 MRGPRX4Q96LA9 322 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 SERHL2Q9H4I8 314 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 NOX1Q9Y5S8 564 aa8.61□□□□□ -1.03
PCNX1-205ENST00000553508 A0A087X1B8 175 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 TMEM191CA6NGB0 347 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 GPANK1O95872 356 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 NEK2P51955 445 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 KHDC1Q4VXA5 237 aaKnown RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 B3GNTL1Q67FW5 361 aaPredicted RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 FOXR2Q6PJQ5 311 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 MRGPRGQ86SM5 289 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 ARHGEF19Q8IW93 802 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 NLGN4YQ8NFZ3 816 aaPredicted RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 DMRTA2Q96SC8 542 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 PRRX2Q99811 253 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 ALOXE3Q9BYJ1 711 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 CYP4F11Q9HBI6 524 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 DDX56Q9NY93 547 aaKnown RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 DKK2Q9UBU2 259 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 IP6K2Q9UHH9 426 aa8.6□□□□□ -1.03
PCNX1-205ENST00000553508 MTO1Q9Y2Z2 717 aaKnown RBP8.6□□□□□ -1.03
PCNX1-205ENST00000553508 LRRC14BA6NHZ5 514 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 ERN1O75460 977 aaKnown RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 AGFG2O95081 481 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 SPDEFO95238 335 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 RPLP2P05387 115 aaKnown RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 CD1AP06126 327 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 MTHFD1P11586 935 aaKnown RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 PDCP20941 246 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 ZEB1P37275 1124 aaPredicted RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 DSC2Q02487 901 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 RAB39AQ14964 217 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 PABPC1LQ4VXU2 614 aaKnown RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 UTP14CQ5TAP6 766 aaKnown RBP8.59□□□□□ -1.03
PCNX1-205ENST00000553508 TTC7BQ86TV6 843 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 CPA6Q8N4T0 437 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 STAG1Q8WVM7 1258 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
PCNX1-205ENST00000553508 FOXN1O15353 648 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 CDKL5O76039 1030 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 HAUS5O94927 633 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
PCNX1-205ENST00000553508 TLE1Q04724 770 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-205ENST00000553508 CATIPQ7Z7H3 387 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 NUP133Q8WUM0 1156 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 HSPBAP1Q96EW2 488 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 CEP89Q96ST8 783 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 PACSIN1Q9BY11 444 aa8.58□□□□□ -1.04
PCNX1-205ENST00000553508 CFAP20Q9Y6A4 193 aaKnown RBP8.58□□□□□ -1.04
PCNX1-205ENST00000553508 WDR33Q9C0J8 1336 aaKnown RBP8.57□□□□□ -1.04
PCNX1-205ENST00000553508 COL4A3Q01955 1670 aa8.57□□□□□ -1.04
PCNX1-205ENST00000553508 ALDH1L1O75891 902 aa8.57□□□□□ -1.04
PCNX1-205ENST00000553508 PDGFRBP09619 1106 aa8.57□□□□□ -1.04
PCNX1-205ENST00000553508 FLYWCH1Q4VC44 716 aa8.57□□□□□ -1.04
PCNX1-205ENST00000553508 NSUN6Q8TEA1 469 aaKnown RBP8.57□□□□□ -1.04
PCNX1-205ENST00000553508 ASB10Q8WXI3 467 aa8.57□□□□□ -1.04
PCNX1-205ENST00000553508 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms