RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 Q6ZRM9 215 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
ATXN3-218ENST00000553309 EPC1Q9H2F5 836 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 POGKQ9P215 609 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
ATXN3-218ENST00000553309 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 FZD7O75084 574 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 C1SP09871 688 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
ATXN3-218ENST00000553309 ENPP1P22413 925 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 SCAND1P57086 179 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 TMPRSS15P98073 1019 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 DUSP2Q05923 314 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 FAPQ12884 760 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 SMIM5Q71RC9 77 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
ATXN3-218ENST00000553309 ZNF703Q9H7S9 590 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-218ENST00000553309 XDHP47989 1333 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 TRPM1Q7Z4N2 1603 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
ATXN3-218ENST00000553309 GCP02774 474 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 GNAT2P19087 354 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 GDF5P43026 501 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 PTH1RQ03431 593 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-218ENST00000553309 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
ATXN3-218ENST00000553309 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 USP51Q70EK9 711 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 MB21D1Q8N884 522 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
ATXN3-218ENST00000553309 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 PARPBPQ9NWS1 579 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
ATXN3-218ENST00000553309 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 KAT6BQ8WYB5 2073 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 PRAMEF4O60810 478 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
ATXN3-218ENST00000553309 CFBP00751 764 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 ACVRL1P37023 503 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 CDK17Q00537 523 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-218ENST00000553309 MNTQ99583 582 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-218ENST00000553309 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-218ENST00000553309 CEP72Q9P209 647 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 PIK3C2GO75747 1445 aa6.5□□□□□ -1.37
ATXN3-218ENST00000553309 PIK3C2AO00443 1686 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 PLEKHG2Q9H7P9 1386 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 GPR39O43194 453 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 HSPA8P11142 646 aaKnown RBP6.49□□□□□ -1.37
ATXN3-218ENST00000553309 CTSSP25774 331 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 GZMKP49863 264 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 RABGGTBP53611 331 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 WNT3AP56704 352 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
ATXN3-218ENST00000553309 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
ATXN3-218ENST00000553309 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
ATXN3-218ENST00000553309 FAM126AQ9BYI3 521 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-218ENST00000553309 PKD1L3Q7Z443 1732 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 C10orf71Q711Q0 1435 aa6.49□□□□□ -1.37
ATXN3-218ENST00000553309 PXDNLA1KZ92 1463 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 EIF3AQ14152 1382 aaKnown RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 TMEM127O75204 238 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 GYPEP15421 78 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 HK1P19367 917 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 MEF2AQ02078 507 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 PAWRQ96IZ0 340 aaKnown RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 C14orf119Q9NWQ9 140 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
ATXN3-218ENST00000553309 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-218ENST00000553309 HDAC5Q9UQL6 1122 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms