RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PRR16Q569H4 304 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 NT5DC1Q5TFE4 455 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 HIBCHQ6NVY1 386 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 RNF152Q8N8N0 203 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 NUDT10Q8NFP7 164 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 BRIX1Q8TDN6 353 aaKnown RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 ARL8AQ96BM9 186 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 NUDT11Q96G61 164 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 SIDT1Q9NXL6 827 aaKnown RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 CPNE7Q9UBL6 633 aa6.13□□□□□ -1.43
SCFD1-209ENST00000553280 AJAP1Q9UKB5 411 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-209ENST00000553280 SH3D21A4FU49 640 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 F8W8V4 182 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 NPHP1O15259 732 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 MRE11P49959 708 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 EMC10Q5UCC4 262 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 Q6ZUG5 572 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 GPR155Q7Z3F1 870 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 ZNF354CQ86Y25 554 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 REPS2Q8NFH8 660 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 CXorf38Q8TB03 319 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 STON2Q8WXE9 905 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 GCDHQ92947 438 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-209ENST00000553280 AJUBAQ96IF1 538 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 SCLT1Q96NL6 688 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 USP40Q9NVE5 1235 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-209ENST00000553280 STK32BQ9NY57 414 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 CDC23Q9UJX2 597 aa6.12□□□□□ -1.43
SCFD1-209ENST00000553280 RBM8AQ9Y5S9 174 aaKnown RBP6.12□□□□□ -1.43
SCFD1-209ENST00000553280 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 A0A087WV62 115 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 hCG_1642624A0A1W2PR95 340 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 PRICKLE3O43900 615 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 PARP1P09874 1014 aaKnown RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 PTPN7P35236 360 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 DUSP2Q05923 314 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 SP140Q13342 867 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 ZNF572Q7Z3I7 529 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 REXO1L1PQ8IX06 675 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 CARFQ8N187 725 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 CELF5Q8N6W0 485 aaKnown RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 SLC7A6OSQ96CW6 309 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 NMD3Q96D46 503 aaKnown RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 TMEM41AQ96HV5 264 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 TEPSINQ96N21 525 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 NAP1L4Q99733 375 aaKnown RBP6.11□□□□□ -1.43
SCFD1-209ENST00000553280 CARD11Q9BXL7 1154 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 TRIM54Q9BYV2 358 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 DPH1Q9BZG8 443 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 OR10A2Q9H208 303 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 L2HGDHQ9H9P8 463 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
SCFD1-209ENST00000553280 WNT10BO00744 389 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 APOL1O14791 398 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 TEX33O43247 280 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 WDHD1O75717 1129 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 TOX4O94842 621 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 JUNP05412 331 aaKnown RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 THP07101 528 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 VSIG10L2P0DP72 767 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 ALOX15P16050 662 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 FPR1P21462 350 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 CHKAP35790 457 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 TECP42680 631 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 GRK6P43250 576 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 FLT3LGP49771 235 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 RENBPP51606 427 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 PDZD4Q76G19 769 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 LIX1LQ8IVB5 337 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 SYTL1Q8IYJ3 562 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 CCDC33Q8N5R6 958 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 DCBLD1Q8N8Z6 715 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 ATP11CQ8NB49 1132 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 SPATA5Q8NB90 893 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 OR10H5Q8NGA6 315 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 CCT6BQ92526 530 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 YTHDC1Q96MU7 727 aaKnown RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 SLC6A15Q9H2J7 730 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 AGO4Q9HCK5 861 aaKnown RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 MOCS1Q9NZB8 636 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 NTMQ9P121 344 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 COL20A1Q9P218 1284 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 AFF4Q9UHB7 1163 aaKnown RBP6.1□□□□□ -1.43
SCFD1-209ENST00000553280 FAM184BQ9ULE4 1060 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 MED16Q9Y2X0 877 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 PCDHGB2Q9Y5G2 931 aa6.1□□□□□ -1.43
SCFD1-209ENST00000553280 A0A1W2PPC4 97 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 AHSGP02765 367 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 HDCP19113 662 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms