RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 KCTD10Q9H3F6 313 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 KIAA1586Q9HCI6 787 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 THEGQ9P2T0 379 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 C2orf71A6NGG8 1288 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 PDXKO00764 312 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 LRPAP1P30533 357 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 NRIP1P48552 1158 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 DUSP6Q16828 381 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 DCLRE1AQ6PJP8 1040 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 GUF1Q8N442 669 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 C3orf58Q8NDZ4 430 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 HASPINQ8TF76 798 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 RABGGTAQ92696 567 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 PABPC5Q96DU9 382 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 FAM212AQ96EL1 285 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 GPR62Q9BZJ7 368 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 MRPL17Q9NRX2 175 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 COG5Q9UP83 839 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 SSX2IPQ9Y2D8 614 aa12.71□□□□□ -0.37
TRAFD1-209ENST00000552896 GOLGA8IPA6NC78 632 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 GOLGA8JA6NMD2 632 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 TRAPPC3O43617 180 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 TADA2AO75478 443 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 B3GAT3O94766 335 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 CYP2J2P51589 502 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 DSG1Q02413 1049 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 CREMQ03060 361 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 SPAG1Q07617 926 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 SNRNP35Q16560 246 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 NFIL3Q16649 462 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 SPATA1Q5VX52 437 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 CBWD2Q8IUF1 395 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 SLC9A9Q8IVB4 645 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 XXYLT1Q8NBI6 393 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 TLE6Q9H808 572 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
TRAFD1-209ENST00000552896 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 ZNF233A6NK53 670 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 GOLGA6L22H0YM25 854 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 CLIC2O15247 247 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 CALUO43852 315 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 LILRB3O75022 631 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 NR3C1P04150 777 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 SRGAP2BP0DMP2 458 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 CA8P35219 290 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 WNT7BP56706 349 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 MYBPC2Q14324 1141 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 SURF1Q15526 300 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 KIAA0319Q5VV43 1072 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 CD300LGQ6UXG3 332 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 NOC3LQ8WTT2 800 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 PIK3R5Q8WYR1 880 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 ERCC4Q92889 916 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 HLA-CQ95604 372 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 TTPALQ9BTX7 342 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
TRAFD1-209ENST00000552896 NCOR1O75376 2440 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 TBX10O75333 385 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 CXCL14O95715 111 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 GLP2RO95838 553 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 ADH1AP07327 375 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 FGFR3P22607 806 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PAX3P23760 479 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 MCM4P33991 863 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 GTF2F1P35269 517 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 PPP1R2P41236 205 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 GUCY2FP51841 1108 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 ADAM15Q13444 863 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 KCNC3Q14003 757 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
TRAFD1-209ENST00000552896 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms