RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
CDK4-208ENST00000551706 BCL7CQ8WUZ0 217 aaPredicted RBP18.84■□□□□ 0.61
CDK4-208ENST00000551706 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
CDK4-208ENST00000551706 ZMAT2Q96NC0 199 aaKnown RBP18.84■□□□□ 0.61
CDK4-208ENST00000551706 IRF2BPLQ9H1B7 796 aa18.84■□□□□ 0.61
CDK4-208ENST00000551706 IKZF4Q9H2S9 585 aa18.84■□□□□ 0.61
CDK4-208ENST00000551706 KMT2EQ8IZD2 1858 aa18.84■□□□□ 0.61
CDK4-208ENST00000551706 MYO7AQ13402 2215 aa18.84■□□□□ 0.61
CDK4-208ENST00000551706 MYO15AQ9UKN7 3530 aa18.83■□□□□ 0.61
CDK4-208ENST00000551706 GADD45BO75293 160 aaPredicted RBP18.83■□□□□ 0.6
CDK4-208ENST00000551706 TADA2AO75478 443 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 SMC2O95347 1197 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 RPL9P32969 192 aaKnown RBP18.83■□□□□ 0.6
CDK4-208ENST00000551706 HOXD13P35453 343 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 ACOT2P49753 483 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 STK4Q13043 487 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 KNOP1Q1ED39 458 aaKnown RBP18.83■□□□□ 0.6
CDK4-208ENST00000551706 ZBTB41Q5SVQ8 909 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 KIAA0895Q8NCT3 520 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 GOLGA5Q8TBA6 731 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 ATOH1Q92858 354 aaPredicted RBP18.83■□□□□ 0.6
CDK4-208ENST00000551706 ZBP1Q9H171 429 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 ASB7Q9H672 318 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 RMND1Q9NWS8 449 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 ADAM28Q9UKQ2 775 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 SSX2IPQ9Y2D8 614 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 CACNA1HO95180 2353 aa18.83■□□□□ 0.6
CDK4-208ENST00000551706 LACTBL1A8MY62 500 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 TMEM189-UBE2V1I3L0A0 370 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 MEFVO15553 781 aaPredicted RBP18.82■□□□□ 0.6
CDK4-208ENST00000551706 EXTL3O43909 919 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 SOD2P04179 222 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 CTSAP10619 480 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 ZXDAP98168 799 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 HYAL1Q12794 435 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 PLPP4Q5VZY2 271 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 DCLRE1AQ6PJP8 1040 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 NELFCDQ8IXH7 590 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 MRPL43Q8N983 215 aaKnown RBP18.82■□□□□ 0.6
CDK4-208ENST00000551706 KIF12Q96FN5 646 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 GBP4Q96PP9 640 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 CDCA3Q99618 268 aaPredicted RBP18.82■□□□□ 0.6
CDK4-208ENST00000551706 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 FAM213AQ9BRX8 229 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 TLE6Q9H808 572 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 KIAA1586Q9HCI6 787 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 CD207Q9UJ71 328 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 UBQLN1Q9UMX0 589 aaKnown RBP18.82■□□□□ 0.6
CDK4-208ENST00000551706 DERAQ9Y315 318 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 IRAK3Q9Y616 596 aa18.82■□□□□ 0.6
CDK4-208ENST00000551706 SF3B1O75533 1304 aaKnown RBP eCLIP18.81■□□□□ 0.68e-9■■■■■ 155.1
CDK4-208ENST00000551706 TDRD15B5MCY1 1934 aaKnown RBP18.81■□□□□ 0.6
CDK4-208ENST00000551706 TGFB1I1O43294 461 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
CDK4-208ENST00000551706 IL18RAPO95256 599 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 CXCL14O95715 111 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 CYP3A5P20815 502 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
CDK4-208ENST00000551706 PNOCQ13519 176 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 UPP1Q16831 310 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 FUT10Q6P4F1 479 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
CDK4-208ENST00000551706 GPD1LQ8N335 351 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 GSDMAQ96QA5 445 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 HERC2P3Q9BVR0 1158 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 VN1R3Q9BXE9 311 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
CDK4-208ENST00000551706 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 C2CD2Q9Y426 696 aa18.81■□□□□ 0.6
CDK4-208ENST00000551706 PTPRZ1P23471 2315 aaPredicted RBP18.8■□□□□ 0.6
CDK4-208ENST00000551706 ATG2AQ2TAZ0 1938 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 PLXNA4Q9HCM2 1894 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 TBX10O75333 385 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 B3GAT3O94766 335 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 KIF4AO95239 1232 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 EFEMP2O95967 443 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 URODP06132 367 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 CLCNKBP51801 687 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 SOX4Q06945 474 aaPredicted RBP18.8■□□□□ 0.6
CDK4-208ENST00000551706 ZBTB6Q15916 424 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 CRELD2Q6UXH1 353 aaPredicted RBP18.8■□□□□ 0.6
CDK4-208ENST00000551706 NT5DC4Q86YG4 428 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 BRSK2Q8IWQ3 736 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 C12orf56Q8IXR9 622 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 C18orf25Q96B23 403 aaPredicted RBP18.8■□□□□ 0.6
CDK4-208ENST00000551706 SAAL1Q96ER3 474 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 PCIF1Q9H4Z3 704 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 MRPL17Q9NRX2 175 aaKnown RBP18.8■□□□□ 0.6
CDK4-208ENST00000551706 HSPBP1Q9NZL4 362 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 CACNG4Q9UBN1 327 aa18.8■□□□□ 0.6
CDK4-208ENST00000551706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.79■□□□□ 0.6
CDK4-208ENST00000551706 C2orf71A6NGG8 1288 aa18.79■□□□□ 0.6
CDK4-208ENST00000551706 F8W810 466 aa18.79■□□□□ 0.6
CDK4-208ENST00000551706 PODXLO00592 558 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms