RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PODXLO00592 558 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 KIF4AO95239 1232 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CCNE1P24864 410 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CASP4P49662 377 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 ERVFC1P60507 584 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 TFAMQ00059 246 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CYP24A1Q07973 514 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CAMK1Q14012 370 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 NFIL3Q16649 462 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 UPP1Q16831 310 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 SPATA1Q5VX52 437 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 ANKRD40Q6AI12 368 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 FUT10Q6P4F1 479 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 EFCAB13Q8IY85 973 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 VPS52Q8N1B4 723 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 TMEM130Q8N3G9 435 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 MAFAQ8NHW3 353 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 HASPINQ8TF76 798 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CACTINQ8WUQ7 758 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 ANK1P16157 1881 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 PLXNA4Q9HCM2 1894 aa17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 COL4A4P53420 1690 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-209ENST00000550872 CETN3O15182 167 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 PTMSP20962 102 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 LRPAP1P30533 357 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 IRS1P35568 1242 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 PMS1P54277 932 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 BMS1Q14692 1282 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 PSMD6Q15008 389 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 LMBRD2Q68DH5 695 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 NELFBQ8WX92 580 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 CCDC127Q96BQ5 260 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 MFSD14AQ96MC6 490 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 FNBP1Q96RU3 617 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 TCF25Q9BQ70 676 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 VN1R3Q9BXE9 311 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 ENTPD7Q9NQZ7 604 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 DPP3Q9NY33 737 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 STK39Q9UEW8 545 aa17.57■□□□□ 0.4
CHMP1A-209ENST00000550872 TRIM49BA6NDI0 452 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 TMEM189-UBE2V1I3L0A0 370 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 TMEM191BP0C7N4 346 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 DLATP10515 647 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 TNNI1P19237 187 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 IGFBP6P24592 240 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 CA8P35219 290 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 STX17P56962 302 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 LRRC63Q05C16 580 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 CCDC183Q5T5S1 534 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 PLPP4Q5VZY2 271 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 PDE12Q6L8Q7 609 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 TAS1R1Q7RTX1 841 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 EEF2KMTQ96G04 330 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 GPR62Q9BZJ7 368 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 CTNND2Q9UQB3 1225 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 NUB1Q9Y5A7 615 aa17.56■□□□□ 0.4
CHMP1A-209ENST00000550872 SF3B1O75533 1304 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 FSCN2O14926 492 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 TRAPPC3O43617 180 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 CXCL14O95715 111 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 SOD2P04179 222 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 PSMC2P35998 433 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 BRCC3P46736 316 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 NLRP12P59046 1061 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 ELAVL2Q12926 359 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 PAK1Q13153 545 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 CCDC85BQ15834 202 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 DUOXA2Q1HG44 320 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 C9orf57Q5W0N0 161 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 KIAA1841Q6NSI8 718 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 CD300LGQ6UXG3 332 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 WDR49Q8IV35 697 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 FAM186BQ8IYM0 893 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 MLKLQ8NB16 471 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 C3orf58Q8NDZ4 430 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 PPM1EQ8WY54 764 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 ANKRD36BP1Q96IX9 119 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 FAM84AQ96KN4 292 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 POP1Q99575 1024 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 CGRRF1Q99675 332 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 HERC2P3Q9BVR0 1158 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 NSUN3Q9H649 340 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 INTS13Q9NVM9 706 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 PCDHGC5Q9Y5F6 944 aa17.55■□□□□ 0.4
CHMP1A-209ENST00000550872 PPEF2O14830 753 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 MAPK13O15264 365 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 AKAP3O75969 853 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 EFEMP2O95967 443 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 TNNC2P02585 160 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 CTSAP10619 480 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 SMC1AQ14683 1233 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 USP41Q3LFD5 358 aa17.54■□□□□ 0.4
CHMP1A-209ENST00000550872 FAM171A1Q5VUB5 890 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms