RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 DUSP10Q9Y6W6 482 aa6.09□□□□□ -1.43
LIMA1-205ENST00000550592 KIF13AQ9H1H9 1805 aa6.09□□□□□ -1.44
LIMA1-205ENST00000550592 ARID4BQ4LE39 1312 aaPredicted RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 KDM6BO15054 1643 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 MYO1FO00160 1098 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 TPD52L2O43399 206 aaKnown RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 INHBBP09529 407 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 SBK3P0C264 359 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 TM4SF4P48230 202 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 ALDH5A1P51649 535 aaPredicted RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 CLRN1P58418 232 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 MORC3Q14149 939 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 GRM7Q14831 915 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 VPS72Q15906 364 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 KHDC1LQ5JSQ8 128 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 FKBP15Q5T1M5 1219 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 ANKS6Q68DC2 871 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 MFSD5Q6N075 450 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 GPRIN1Q7Z2K8 1008 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 PHKBQ93100 1093 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 GJA10Q969M2 543 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 KCNC2Q96PR1 638 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 NDC1Q9BTX1 674 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 APOL5Q9BWW9 433 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 BTBD1Q9H0C5 482 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 PIH1D1Q9NWS0 290 aaKnown RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 PLA2G3Q9NZ20 509 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 ZDHHC8Q9ULC8 765 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 PCDHA6Q9UN73 950 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 EIF4G3O43432 1585 aaKnown RBP6.08□□□□□ -1.44
LIMA1-205ENST00000550592 CLASP1Q7Z460 1538 aa6.08□□□□□ -1.44
LIMA1-205ENST00000550592 USP19O94966 1318 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 SYNJ1O43426 1573 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 ISM1B1AKI9 464 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 SLC43A1O75387 559 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 AMHP03971 560 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 NPR1P16066 1061 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 PIK3CGP48736 1102 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 METTL24Q5JXM2 366 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 APBB1IPQ7Z5R6 666 aaPredicted RBP6.07□□□□□ -1.44
LIMA1-205ENST00000550592 FAM83AQ86UY5 434 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
LIMA1-205ENST00000550592 PARD3BQ8TEW8 1205 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 EPC1Q9H2F5 836 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 CNNM1Q9NRU3 951 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 PPP4R1LQ9P1A2 415 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 HECAQ9UBI9 543 aaPredicted RBP6.07□□□□□ -1.44
LIMA1-205ENST00000550592 CPA4Q9UI42 421 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 CFTRP13569 1480 aa6.07□□□□□ -1.44
LIMA1-205ENST00000550592 ADAMTS20P59510 1910 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 TCRBV7S2A1N4TA0A589 114 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 MATN4O95460 622 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 AHSGP02765 367 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 MYL3P08590 195 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 KITP10721 976 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 SLC6A4P31645 630 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 PIK3CBP42338 1070 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 ARFIP2P53365 341 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 FMO1Q01740 532 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 IFIT5Q13325 482 aaKnown RBP6.06□□□□□ -1.44
LIMA1-205ENST00000550592 UBXN2BQ14CS0 331 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 CCDC93Q567U6 631 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 ZFYVE27Q5T4F4 411 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 ZNF529Q6P280 563 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 TOGARAM2Q6ZUX3 1019 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 MORC1Q86VD1 984 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 XYLT1Q86Y38 959 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 SIAH1Q8IUQ4 282 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 TNIP3Q96KP6 325 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 GNRHR2Q96P88 292 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 TBCBQ99426 244 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 PSMD1Q99460 953 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 MYD88Q99836 296 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 RSAD1Q9HA92 442 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 KIAA1586Q9HCI6 787 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 RLIMQ9NVW2 624 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 JKAMPQ9P055 326 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
LIMA1-205ENST00000550592 FOXN3O00409 490 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-205ENST00000550592 KIAA0391O15091 583 aaKnown RBP6.05□□□□□ -1.44
LIMA1-205ENST00000550592 RAD17O75943 681 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 LDHAP00338 332 aaKnown RBP6.05□□□□□ -1.44
LIMA1-205ENST00000550592 POMCP01189 267 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 ZSCAN22P10073 491 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-205ENST00000550592 BMP7P18075 431 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 HDCP19113 662 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 EN2P19622 333 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-205ENST00000550592 SLC7A1P30825 629 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 CNR2P34972 360 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 SOX8P57073 446 aa6.05□□□□□ -1.44
LIMA1-205ENST00000550592 KIF22Q14807 665 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms