RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PDE5AO76074 875 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 FAM153BP0C7A2 387 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 ENO3P13929 434 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 TRPC1P48995 793 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 EIF3EP60228 445 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 OVGP1Q12889 678 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 FAM153CQ494X1 144 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 CEP55Q53EZ4 464 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 TSEN2Q8NCE0 465 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 EXT2Q93063 718 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 DDX28Q9NUL7 540 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 KLHL11Q9NVR0 708 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 FAM153AQ9UHL3 310 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 UTYO14607 1347 aa16.64■□□□□ 0.26
RBFOX1-212ENST00000550418 PIK3R2O00459 728 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 TRAPPC3O43617 180 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 PSAPP07602 524 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGDIAP52565 204 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 HEATR6Q6AI08 1181 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 BFARQ9NZS9 450 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 CACNA2D1P54289 1103 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 ZNF844Q08AG5 666 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 ARID3BQ8IVW6 561 aaPredicted RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 SCG3Q8WXD2 468 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 AURKCQ9UQB9 309 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 ESRRBO95718 433 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 APOA1P02647 267 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 DAB1O75553 588 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 OSBPP22059 807 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 C18orf8Q96DM3 657 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 AGXT2Q9BYV1 514 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 AS3MTQ9HBK9 375 aa16.64■□□□□ 0.25
RBFOX1-212ENST00000550418 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 LOC100653049A0A140TA62 436 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 XPO1O14980 1071 aaKnown RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 KRT34O76011 436 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 SARSP49591 514 aaKnown RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 IGBP1P78318 339 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 ELF3P78545 371 aaPredicted RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 MRPS15P82914 257 aaKnown RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 ADGRF4Q8IZF3 695 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 USP6NLQ92738 828 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 E2F7Q96AV8 911 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 SNX25Q9H3E2 840 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 LRCH1Q9Y2L9 728 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 XPOTO43592 962 aaKnown RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 PTPN4P29074 926 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 SERPINB10P48595 397 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 TAP1Q03518 808 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 HAUS6Q7Z4H7 955 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 ZSWIM1Q9BR11 485 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 ZC3H7BQ9UGR2 993 aaKnown RBP16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 MINPP1Q9UNW1 487 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 ATP9AO75110 1047 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 OATP04181 439 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 KRT4P19013 534 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 KCNA4P22459 653 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 CDH6P55285 790 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 CENPCQ03188 943 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 CREG2Q8IUH2 290 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 NCLNQ969V3 563 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 FAM118BQ9BPY3 351 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 TLR10Q9BXR5 811 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 DTNAQ9Y4J8 743 aa16.63■□□□□ 0.25
RBFOX1-212ENST00000550418 AIM2O14862 343 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 ARHGEF9O43307 516 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 SNRPAP09012 282 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 SDC4P31431 198 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 JAK3P52333 1124 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 POU5F1BQ06416 359 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 C16orf89Q6UX73 402 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 RPF1Q9H9Y2 349 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 CACYBPQ9HB71 228 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 COL3A1P02461 1466 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 TTMPQ5BVD1 217 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 FAM160B2Q86V87 743 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 BBS5Q8N3I7 341 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 LXNQ9BS40 222 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 CDC42EP4Q9H3Q1 356 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 SPAG6O75602 509 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
RBFOX1-212ENST00000550418 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms